RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TGM3Q08188 693 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 POU4F2Q12837 409 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 ST3GAL2Q16842 350 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 SYT14P1Q58G82 188 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 KIAA1324Q6UXG2 1013 aaKnown RBP15.66■□□□□ 0.1
PACS1-201ENST00000320580 C6orf120Q7Z4R8 191 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 HUS1BQ8NHY5 278 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 BRIX1Q8TDN6 353 aaKnown RBP15.66■□□□□ 0.1
PACS1-201ENST00000320580 ATF6BQ99941 703 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 POLDIP3Q9BY77 421 aaKnown RBP15.66■□□□□ 0.1
PACS1-201ENST00000320580 B3GAT2Q9NPZ5 323 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 SLC22A11Q9NSA0 550 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 ARL5CA6NH57 179 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 EDNRBP24530 442 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 MAT2AP31153 395 aaKnown RBP15.66■□□□□ 0.1
PACS1-201ENST00000320580 SOX18P35713 384 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 KHKP50053 298 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 UBE2IP63279 158 aaKnown RBP15.66■□□□□ 0.1
PACS1-201ENST00000320580 PTPRRQ15256 657 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 ODF4Q2M2E3 257 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 SFRP5Q5T4F7 317 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 MLIPQ5VWP3 458 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 ESPNLQ6ZVH7 1005 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 GPAT4Q86UL3 456 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 OR7G2Q8NG99 324 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 WDR20Q8TBZ3 569 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 MSLNLQ96KJ4 702 aa15.66■□□□□ 0.1
PACS1-201ENST00000320580 VNN2O95498 520 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 LGI1O95970 557 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 EIF4EP06730 217 aaKnown RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 MCCD1P59942 119 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 TSSK4Q6SA08 328 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 ZNF551Q7Z340 670 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 PEG10Q86TG7 708 aaKnown RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 C17orf64Q86WR6 236 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 SAMD14Q8IZD0 417 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 CD180Q99467 661 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 MED18Q9BUE0 208 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 HRH4Q9H3N8 390 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 TRBV2A0A0J9YWF9 115 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 SNRNP70P08621 437 aaKnown RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 GJA1P17302 382 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 DYRK1AQ13627 763 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 RAB33AQ14088 237 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 MINDY4Q4G0A6 757 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 ATCAYQ86WG3 371 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 DUSP19Q8WTR2 217 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 SAMD11Q96NU1 681 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 LGR4Q9BXB1 951 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 NME7Q9Y5B8 376 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 RNF13O43567 381 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 CA12O43570 354 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 IFNA4P05014 189 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 GIPP09681 153 aaPredicted RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 ACVR2AP27037 513 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 PNLIPRP1P54315 467 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 AP1S1P61966 158 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 FKBP1BP68106 108 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 C10orf111Q8N326 155 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 BBS10Q8TAM1 723 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 NSMAFQ92636 917 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 C3orf49Q96BT1 292 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 RBP7Q96R05 134 aa15.65■□□□□ 0.1
PACS1-201ENST00000320580 MYEF2Q9P2K5 600 aaKnown RBP15.65■□□□□ 0.1
PACS1-201ENST00000320580 MEIKINA0A087WXM9 373 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 TYRP14679 529 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 MTNR1BP49286 362 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 NCBP2P52298 156 aaKnown RBP eCLIP15.64■□□□□ 0.09
PACS1-201ENST00000320580 POLR2LP62875 67 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 EFCAB11Q9BUY7 163 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 COL4A5P29400 1685 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 TAPBPO15533 448 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 SPARCP09486 303 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 NAA10P41227 235 aaPredicted RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 CLCN7P51798 805 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 SNRPEP62304 92 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 ZNF628Q5EBL2 1059 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 TMPRSS12Q86WS5 348 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 ZNF676Q8N7Q3 588 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 TRMT61BQ9BVS5 477 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 C1QTNF3Q9BXJ4 246 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 EVA1AQ9H8M9 152 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 MEIS3P1A6NDR6 274 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 ZNF593O00488 134 aaPredicted RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 KHNYNO15037 678 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 RAD52P43351 418 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 RBM39Q14498 530 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 SMAP2Q8WU79 429 aaPredicted RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 TOE1Q96GM8 510 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 MCHR1Q99705 422 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 CMSS1Q9BQ75 279 aaKnown RBP15.64■□□□□ 0.09
PACS1-201ENST00000320580 R3HDMLQ9H3Y0 253 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 NLGN3Q9NZ94 848 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 ASH2LQ9UBL3 628 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 SLC6A14Q9UN76 642 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 SLC27A6Q9Y2P4 619 aa15.64■□□□□ 0.09
PACS1-201ENST00000320580 CASC3O15234 703 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms