RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 HCAR1Q9BXC0 346 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 NIPAL2Q9H841 368 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 HINT3Q9NQE9 182 aaKnown RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 SEMA4GQ9NTN9 838 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 TRAV27A0A087WT01 109 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 A0A1W2PPL8 197 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 PRAMEF27A3QJZ7 478 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 L7N2F9 121 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 FZD7O75084 574 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 IFNA7P01567 189 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 FBXO45P0C2W1 286 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ACP2P11117 423 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 GABRA5P31644 462 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 PLEKHS1Q5SXH7 462 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 MLIPQ5VWP3 458 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ELP2Q6IA86 826 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 METAP1DQ6UB28 335 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.284e-10■■■■□ 20.7
PABPC1-201ENST00000318607 MS4A15Q8N5U1 240 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 C17orf47Q8NEP4 570 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 SOCS4Q8WXH5 440 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 GLYATL1Q969I3 302 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 TBC1D20Q96BZ9 403 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 PDCD1LG2Q9BQ51 273 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
PABPC1-201ENST00000318607 TEX12Q9BXU0 123 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 ENKD1Q9H0I2 346 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 P2RX2Q9UBL9 471 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 FAM186AA6NE01 2351 aa13.31□□□□□ -0.28
PABPC1-201ENST00000318607 NARSO43776 548 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 EOMESO95936 686 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 TFP02787 698 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 POLR2CP19387 275 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ANXA7P20073 488 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 POLR2LP62875 67 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 AANATQ16613 207 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 SLC6A19Q695T7 634 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 FAM71E1Q6IPT2 247 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 QSOX2Q6ZRP7 698 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 SAMD14Q8IZD0 417 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 MCHR1Q99705 422 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ADAP2Q9NPF8 381 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 SLC43A1O75387 559 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 C1orf105O95561 183 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ANKRD34CP0C6C1 535 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 NPR2P20594 1047 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ADH7P40394 386 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 SNRPGP62308 76 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 CDKN3Q16667 212 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 NXPE4Q6UWF7 544 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 NHLRC1Q6VVB1 395 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 NDUFAF7Q7L592 441 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 OR6K6Q8NGW6 343 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 RPLP0P6Q8NHW5 317 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ZCCHC10Q8TBK6 192 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ZMYND19Q96E35 227 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ALG14Q96F25 216 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 C4orf36Q96KX1 117 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 SFXN2Q96NB2 322 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 C1QTNF7Q9BXJ2 289 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 FKRPQ9H9S5 495 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 CHRM4P08173 479 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 MC3RP41968 323 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 KCNJ5P48544 419 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 TGM3Q08188 693 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 LGALS3BPQ08380 585 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 C21orf62-AS1Q17RA5 79 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 TUSC1Q2TAM9 212 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 LY6G5CQ5SRR4 150 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 RTL4Q6ZR62 310 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 CXXC5Q7LFL8 322 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 OR4Q3Q8NH05 313 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 PIGXQ8TBF5 258 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 DERL3Q96Q80 235 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 MARVELD1Q9BSK0 173 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 AHSPQ9NZD4 102 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 KLK11Q9UBX7 282 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
PABPC1-201ENST00000318607 BAIAP2Q9UQB8 552 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 TRIOO75962 3097 aa13.3□□□□□ -0.28
PABPC1-201ENST00000318607 FGBP02675 491 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 BMP7P18075 431 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
PABPC1-201ENST00000318607 HSF2Q03933 536 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 IDO2Q6ZQW0 420 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 MSANTD1Q6ZTZ1 278 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 PGBD3Q8N328 593 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 OR2T4Q8NH00 348 aa13.29□□□□□ -0.28
PABPC1-201ENST00000318607 PIGUQ9H490 435 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms