RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ATG10Q9H0Y0 220 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR51V1Q9H2C8 321 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CNOT1A5YKK6 2376 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 WNK2Q9Y3S1 2297 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 LRIT2A6NDA9 550 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 NRP1O14786 923 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 MITFO75030 526 aaPredicted RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CFHP08603 1231 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CALCBP10092 127 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 HTR3DQ70Z44 454 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF619Q8N2I2 560 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 STACQ99469 402 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 NMNAT1Q9HAN9 279 aaPredicted RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 SRPK3Q9UPE1 567 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 PLEKHM1Q9Y4G2 1056 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 F5H5P2 479 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 TP73O15350 636 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 MT-ATP6P00846 226 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CD3GP09693 182 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 AOAHP28039 575 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ADARB1P78563 741 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 BCL2A1Q16548 175 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 TXNRD3NBQ6F5E7 133 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR4C11Q6IEV9 310 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CNIH2Q6PI25 160 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR5B12Q96R08 314 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RAD9AQ99638 391 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 PITX2Q99697 317 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 SUSD2Q9UGT4 822 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 DGKQP52824 942 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 DIO3P55073 304 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RPS13P62277 151 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 BEX3Q00994 111 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 SLC35G1Q2M3R5 365 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 DBF4BQ8NFT6 615 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR52P1PQ8NH57 321 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR51I1Q9H343 314 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 EQTNQ9NQ60 294 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OBP2AQ9NY56 170 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 NDOR1Q9UHB4 597 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 EMCNQ9ULC0 261 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 POMT1Q9Y6A1 747 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 KIAA2026Q5HYC2 2103 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 GGT3PA6NGU5 568 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 POP7O75817 140 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 GIPP09681 153 aaPredicted RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 GCAP28676 217 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RABIFP47224 123 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 EMX1Q04741 257 aaPredicted RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CHRFAM7AQ494W8 412 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RTP2Q5QGT7 225 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RASGRP3Q8IV61 690 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 CDH26Q8IXH8 852 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ANKLE1Q8NAG6 615 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR4K5Q8NGD3 323 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 TMED9Q9BVK6 235 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 SLC25A32Q9H2D1 315 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RAB3AP20336 220 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 ELK4P28324 431 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 WEE1P30291 646 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 DEFA5Q01523 94 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 HMGCS1Q01581 520 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 OR10A4Q9H209 315 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 C8orf33Q9H7E9 229 aaPredicted RBP8.34□□□□□ -1.08
COL6A5-202ENST00000312481 NDUFB11Q9NX14 153 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 EBF1Q9UH73 591 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 SH2B3Q9UQQ2 575 aa8.34□□□□□ -1.08
COL6A5-202ENST00000312481 LOC102725191A0A1B0GVB3 256 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 OR2F2O95006 317 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 C6orf47O95873 294 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ASGR2P07307 311 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 IFI6P09912 130 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ADRB3P13945 408 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FPR3P25089 353 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 MECP2P51608 486 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 RAB4BP61018 213 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 OR2F1Q13607 317 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 AMZ1Q400G9 498 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ZNF628Q5EBL2 1059 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 FAM162BQ5T6X4 162 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 PXDC1Q5TGL8 231 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 GTPBP8Q8N3Z3 284 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SLC22A8Q8TCC7 542 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 SORCS1Q8WY21 1168 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 RAB39BQ96DA2 213 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 RNF32Q9H0A6 362 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ARL6Q9H0F7 186 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ADAP2Q9NPF8 381 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ZFR2Q9UPR6 939 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 OR6C65A6NJZ3 312 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 BUD23O43709 281 aaKnown RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 TEAD1P28347 426 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 MASP1P48740 699 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 DUSP3P51452 185 aaPredicted RBP8.33□□□□□ -1.08
COL6A5-202ENST00000312481 ALKAL1Q6UXT8 129 aa8.33□□□□□ -1.08
COL6A5-202ENST00000312481 VRK3Q8IV63 474 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms