RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TAAR2Q9P1P5 351 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 PCDHGA2Q9Y5H1 932 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SCN8AQ9UQD0 1980 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SH3D21A4FU49 640 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 CCR8P51685 355 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 TGM3Q08188 693 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 GPR50Q13585 617 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 HNRNPA1L2Q32P51 320 aaKnown RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SLC36A4Q6YBV0 504 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 NKD1Q969G9 470 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 CXorf40BQ96DE9 158 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 OR51J1Q9H342 316 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 DDX31Q9H8H2 851 aaKnown RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 GPATCH2Q9NW75 528 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SPHK1Q9NYA1 384 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 MARK1Q9P0L2 795 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 PCDHGB1Q9Y5G3 927 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 DOCK8Q8NF50 2099 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SLC5A10A0PJK1 596 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 OLFM2O95897 454 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 ADAP00813 363 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 FURINP09958 794 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 PTPN6P29350 595 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 NUP62P37198 522 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 MC3RP41968 323 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 PDGFRLQ15198 375 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 LRIF1Q5T3J3 769 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 LILRA6Q6PI73 481 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 KIF18BQ86Y91 864 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 OR9A2Q8NGT5 310 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 GCDHQ92947 438 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 RIPOR3Q96MK2 946 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 RSPH9Q9H1X1 276 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 DPEP2Q9H4A9 486 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 C3orf14Q9HBI5 128 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 P2RX2Q9UBL9 471 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 AK6Q9Y3D8 172 aaKnown RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 ZC3H12DA2A288 527 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 FAM86C2PA6NEL3 165 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 HLA-DQA2P01906 255 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 HMGN2P05204 90 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 H2AFB2P0C5Z0 115 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 GKN3PP0CG01 181 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 FUT1P19526 365 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 IGFBP4P22692 258 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SHC1P29353 583 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 LBX1P52954 281 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 PSMA6P60900 246 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SP140Q13342 867 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ZNF77Q15935 545 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ZDHHC20Q5W0Z9 365 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ACSM5Q6NUN0 579 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 FIGNL1Q6PIW4 674 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 PRSS45Q7RTY3 260 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ANKRD53Q8N9V6 530 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 UBE2E3Q969T4 207 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ZDHHC5Q9C0B5 715 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 NUP50Q9UKX7 468 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SDK2Q58EX2 2172 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 LDB3O75112 727 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SPDEFO95238 335 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ACADMP11310 421 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 RFX2P48378 723 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 KIAA1024LP59773 190 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 C4orf46Q504U0 113 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DPPA4Q7L190 304 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 NRMQ8IXM6 262 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SLC7A13Q8TCU3 470 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 MVB12BQ9H7P6 319 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SYNDIG1Q9H7V2 258 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 A0A0B4J203 849 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 A0A1B0GW55 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 MEIS3P1A6NDR6 274 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 SCN2BO60939 215 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ASGR2P07307 311 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 RPS5P46782 204 aaKnown RBP11.88□□□□□ -0.51
RETREG3-201ENST00000309428 CLDN12P56749 244 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 CDK3Q00526 305 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 ARSKQ6UWY0 536 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
RETREG3-201ENST00000309428 DCUN1D3Q8IWE4 304 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms