RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FCRL6Q6DN72 434 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR4C11Q6IEV9 310 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR52B6Q8NGF0 335 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FKBP11Q9NYL4 201 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ZDHHC2Q9UIJ5 367 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HIF3AQ9Y2N7 669 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SLCO2B1O94956 709 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ALPLP05186 524 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CPN1P15169 458 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 EARS2Q5JPH6 523 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 CD300LDQ6UXZ3 194 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TMPPEQ6ZT21 453 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 KCNK18Q7Z418 384 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PRSS35Q8N3Z0 413 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR7G1Q8NGA0 311 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 COL26A1Q96A83 441 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FAM136AQ96C01 138 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR5B2Q96R09 309 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NDOR1Q9UHB4 597 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PADI1Q9ULC6 663 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HHLA2Q9UM44 414 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PI4KAP42356 2102 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DRGXA6NNA5 263 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NPIPB8E9PQR5 432 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TOX3O15405 576 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 MAFKO60675 156 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TMEM63AO94886 807 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 BTN3A2P78410 334 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ARFRP1Q13795 201 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GANABQ14697 944 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 MPPED2Q15777 294 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FBXL22Q6P050 247 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ABI3BPQ7Z7G0 1075 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RRNAD1Q96FB5 475 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 LCATP04180 440 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HAPLN1P10915 354 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 RAC2P15153 192 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR1D2P34982 312 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PRAMEF18Q5VWM3 479 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 WBP2NLQ6ICG8 309 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TCEAL8Q8IYN2 117 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RAD9AQ99638 391 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NKX6-2Q9C056 277 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 ABCG4Q9H172 646 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TRDV1A0A1B0GX56 115 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SURF4O15260 269 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CST3P01034 146 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 HOXC4P09017 264 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 RAB3BP20337 219 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NMBRP28336 390 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TAS2R40P59535 323 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PSMA6P60900 246 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 POU6F2P78424 691 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 AMZ1Q400G9 498 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DHRS4L2Q6PKH6 230 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR5AK2Q8NH90 309 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 INTS12Q96CB8 462 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 HDAC8Q9BY41 377 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PGAP2Q9UHJ9 254 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 HEXAP06865 529 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 AKAIN1P0CW23 69 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 APEHP13798 732 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 GPX2P18283 190 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FAM53BQ14153 422 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RAP1GAP2Q684P5 730 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GNPNAT1Q96EK6 184 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 TGM7Q96PF1 710 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 UBL7Q96S82 380 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 EVLQ9UI08 416 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 AGAP5A6NIR3 686 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ECI2O75521 394 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CDK1P06493 297 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CDH12P55289 794 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DEFB115Q30KQ5 88 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 AGBL4Q5VU57 503 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NXPE4Q6UWF7 544 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SYS1Q8N2H4 156 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GREB1Q4ZG55 1949 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 FAM25EA8MYX2 175 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ZNF736B4DX44 427 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 GPR39O43194 453 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DNPH1O43598 174 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 IL32P24001 234 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 COMPP49747 757 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 FOXD4Q12950 439 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 MTM1Q13496 603 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ENPP7Q6UWV6 458 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RSPO2Q6UXX9 243 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 ENTHD1Q8IYW4 607 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 KCNG3Q8TAE7 436 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NICN1Q9BSH3 213 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SAP130Q9H0E3 1048 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NLRC5Q86WI3 1866 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 KIR2DS1A0A191URI9 304 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NDUFB2O95178 105 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SLC34A2O95436 690 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 KIR2DS4P43632 304 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 KIR2DS1Q14954 304 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms