RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MED26O95402 600 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 GCGRP47871 477 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 ATP12AP54707 1039 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 SCGB2A2Q13296 93 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 DGUOKQ16854 277 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 SLC27A4Q6P1M0 643 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 ADGRF3Q8IZF5 1079 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 SLC2A12Q8TD20 617 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 ISL2Q96A47 359 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 LMF2Q9BU23 707 aaKnown RBP8.65□□□□□ -1.03
PTPRE-202ENST00000306042 MENTQ9BUN1 341 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 RBM24Q9BX46 236 aaKnown RBP8.65□□□□□ -1.03
PTPRE-202ENST00000306042 AMBNQ9NP70 447 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 GPR83Q9NYM4 423 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 LRFN1Q9P244 771 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 SATB2Q9UPW6 733 aa8.65□□□□□ -1.03
PTPRE-202ENST00000306042 FTCDNL1E5RQL4 147 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 TOX3O15405 576 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 JRKO75564 520 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 FOLR1P15328 257 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PSMA1P25786 263 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PEX2P28328 305 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 IDUAP35475 653 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GINS1Q14691 196 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SHQ1Q6PI26 577 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 AMER2Q8N7J2 671 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 TSLPQ969D9 159 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MBD1Q9UIS9 605 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 EMC9Q9Y3B6 208 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 ANKRD12Q6UB98 2062 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 M0R3H8 397 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SLC30A4O14863 429 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 FRS3O43559 492 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GREM1O60565 184 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MTHFD2P13995 350 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 POU3F3P20264 500 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GPX3P22352 226 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 IL32P24001 234 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MAP3K8P41279 467 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 LSM3P62310 102 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 COX10Q12887 443 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 IL10RAQ13651 578 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 TMEM176BQ3YBM2 270 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SPANXN2Q5MJ10 180 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SATL1Q86VE3 508 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PARP8Q8N3A8 854 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 AMDHD1Q96NU7 426 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 OR2A14Q96R47 310 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SLC6A20Q9NP91 592 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 A0A0G2JMZ2 1700 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 LRRC37A2A6NM11 1700 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 FAM166BA8MTA8 275 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MSL3P1P0C860 447 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PRKCAP17252 672 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PRKACGP22612 351 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GPR4P46093 362 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 CTXN1P60606 82 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MYBPC3Q14896 1274 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 C6orf52Q5T4I8 152 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 WBP2NLQ6ICG8 309 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 FAM199XQ6PEV8 388 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 ULK3Q6PHR2 472 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 KCTD18Q6PI47 426 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 KLHL36Q8N4N3 616 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GOT1L1Q8NHS2 421 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MPP4Q96JB8 637 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PIGQQ9BRB3 760 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 GLIPR2Q9H4G4 154 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 CDH20Q9HBT6 801 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 TCF7L1Q9HCS4 588 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 VAPAQ9P0L0 249 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PILRBQ9UKJ0 227 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PRAMEF25A6NGN4 478 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PDLIM1O00151 329 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 UTS2O95399 124 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 ANXA2P07355 339 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 FTH1P19P0C7X4 201 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PCGF2P35227 344 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MNDAP41218 407 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 CHAF1BQ13112 559 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 VEZF1Q14119 521 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 ZNF57Q68EA5 555 aaPredicted RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 NRMQ8IXM6 262 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 LAS2Q8IYD9 372 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 MORN4Q8NDC4 146 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 B3GNT7Q8NFL0 401 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 OR8J2Q8NGG1 315 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 COPS4Q9BT78 406 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 DSN1Q9H410 356 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PIGUQ9H490 435 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 RIMS3Q9UJD0 308 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 SLC7A7Q9UM01 511 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 YARS2Q9Y2Z4 477 aaKnown RBP8.64□□□□□ -1.03
PTPRE-202ENST00000306042 PCDHGA8Q9Y5G5 932 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 NPFFR2Q9Y5X5 522 aa8.64□□□□□ -1.03
PTPRE-202ENST00000306042 ANXA2P2A6NMY6 339 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 ARNTLO00327 626 aa8.63□□□□□ -1.03
PTPRE-202ENST00000306042 SPINT1O43278 529 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms