RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 KCNN3Q9UGI6 736 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ITGB7P26010 798 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 RPL26P61254 145 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 GNB1P62873 340 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 Q6ZS52 159 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ZFAND4Q86XD8 727 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 UMODL1-AS1Q8N2C9 162 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 CCL4L1Q8NHW4 92 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 LRR1Q96L50 414 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 OSBPL7Q9BZF2 842 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PLEKHA3Q9HB20 300 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 RPL26L1Q9UNX3 145 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 H0YGG7 62 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TUSC2O75896 110 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 S100A1P23297 94 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 CDKN2CP42773 168 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PITPNBP48739 271 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PSPHP78330 225 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 KCTD18Q6PI47 426 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 LANCL3Q6ZV70 420 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 DEFB108BQ8NET1 73 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 CPNE2Q96FN4 548 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 GDE1Q9NZC3 331 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 SQORQ9Y6N5 450 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 DMRTC1Q5HYR2 192 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ANKRD34AQ69YU3 496 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PTRH1Q86Y79 214 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MISPQ8IVT2 679 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 DPAGT1Q9H3H5 408 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MEX3AA1L020 520 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ITIH1P19827 911 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TNFSF4P23510 183 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 HTR5AP47898 357 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 CLCN2P51788 898 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TPTEP56180 551 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 RAB4BP61018 213 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 BEST3Q8N1M1 668 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MUS81Q96NY9 551 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ATP23Q9Y6H3 246 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 OR2W5A6NFC9 320 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 UGDHO60701 494 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ADAMTS4O75173 837 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 SLC35E2BP0CK96 405 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF12P17014 697 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 HS3ST5Q8IZT8 346 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ENDOVQ8N8Q3 282 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ASCC1Q8N9N2 400 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MED20Q9H944 212 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TIMMDC1Q9NPL8 285 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 LANCL2Q9NS86 450 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MARCH5Q9NX47 278 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TEX10Q9NXF1 929 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 RGPD8O14715 1765 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 GJE1A6NN92 205 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 BCL6P41182 706 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 DCDP81605 110 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 EDDM3AQ14507 147 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 HTR3DQ70Z44 454 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MARCH3Q86UD3 253 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 WFDC8Q8IUA0 241 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 COG8Q96MW5 612 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 AK6Q9Y3D8 172 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PCDHGB2Q9Y5G2 931 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 SLC16A7O60669 478 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 PIAS2O75928 621 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 NOVA1P51513 510 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 GAREM2Q75VX8 874 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 ZSWIM9Q86XI8 627 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 SLITRK4Q8IW52 837 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 TM9SF4Q92544 642 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 EIF5A2Q9GZV4 153 aaKnown RBP7.34□□□□□ -1.23
SCN9A-201ENST00000303354 MUC13Q9H3R2 512 aa7.34□□□□□ -1.23
SCN9A-201ENST00000303354 RBMXP38159 391 aaKnown RBP7.34□□□□□ -1.24
SCN9A-201ENST00000303354 EDDM3BP56851 147 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 CSNK2A1P68400 391 aaPredicted RBP7.34□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF252P-AS1Q0IIN9 211 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 ASTE1Q2TB18 679 aaPredicted RBP7.34□□□□□ -1.24
SCN9A-201ENST00000303354 SLC18B1Q6NT16 456 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 CSNK2A3Q8NEV1 391 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 ACOT12Q8WYK0 555 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 PEX13Q92968 403 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 BORCS5Q969J3 196 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF566Q969W8 418 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 OR7D2Q96RA2 312 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 PLEKHJ1Q9NW61 149 aa7.34□□□□□ -1.24
SCN9A-201ENST00000303354 ZFAND5O76080 213 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TGM1P22735 817 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TNFAIP8L3Q5GJ75 292 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SLC27A4Q6P1M0 643 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 VRK3Q8IV63 474 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SLC35F2Q8IXU6 374 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ANKLE1Q8NAG6 615 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ANKRD27Q96NW4 1050 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 GPR83Q9NYM4 423 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SCML1Q9UN30 329 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 RFPL1O75677 317 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 AIMP2Q13155 320 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 OR5AK2Q8NH90 309 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms