RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NTMT1Q9BV86 223 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SOX17Q9H6I2 414 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SIAEQ9HAT2 523 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 BACE2Q9Y5Z0 518 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 A8MUA0 341 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 A8MVJ9 347 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ARSBP15848 533 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 IVDP26440 423 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 DCTP40126 519 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RAB28P51157 221 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RPL23AP62750 156 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 DUSP7Q16829 419 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ISCA2Q86U28 154 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 NETO1Q8TDF5 533 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 GLYATL2Q8WU03 294 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 MED30Q96HR3 178 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PITX2Q99697 317 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CFAP20Q9Y6A4 193 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 UBFD1O14562 309 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SYT7O43581 403 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 LCMT2O60294 686 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 HNRNPA1P09651 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ADORA3P0DMS8 318 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CSNK2A1P68400 391 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PHF19Q5T6S3 580 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TXNDC8Q6A555 127 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PGM2L1Q6PCE3 622 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TSSK4Q6SA08 328 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CSNK2A3Q8NEV1 391 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SYNPRQ8TBG9 265 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ASB13Q8WXK3 278 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF300Q96RE9 604 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PDE7BQ9NP56 450 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ZFC3H1O60293 1989 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 OIP5O43482 229 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PEX14O75381 377 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RAB3DO95716 219 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SGSHP51688 502 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ERVK-16P61578 105 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SERTAD2Q14140 314 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 IDO2Q6ZQW0 420 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 OR56B2PQ8NGI1 322 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 OR51A7Q8NH64 312 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 WDR20Q8TBZ3 569 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF337Q9Y3M9 751 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PTGDR2Q9Y5Y4 395 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 BTAF1O14981 1849 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 A0A1W2PS29 197 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 COCHO43405 550 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ADAM23O75077 832 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 F7P08709 466 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 BMP1P13497 986 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 NFYAP23511 347 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 AFF3P51826 1226 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CNN3Q15417 329 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 KIAA0907Q7Z7F0 614 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 NRMQ8IXM6 262 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CDRT4Q8N9R6 151 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 IL17RCQ8NAC3 791 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 STEAP2Q8NFT2 490 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 OR4M1Q8NGD0 313 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 THSD1Q9NS62 852 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 GHRLQ9UBU3 117 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM98Q9Y2Y6 226 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RAB8AP61006 207 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 GPR176Q14439 515 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 HBMQ6B0K9 141 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SBSNQ6UWP8 590 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CDHR3Q6ZTQ4 885 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF695Q8IW36 515 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM185AQ8NFB2 350 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SAMD11Q96NU1 681 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 BTBD2Q9BX70 525 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 GSTO2Q9H4Y5 243 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SLC22A7Q9Y694 548 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TNRC6CQ9HCJ0 1690 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CRTAPO75718 401 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ELNP15502 786 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 BPIP17213 487 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 IDH3GP51553 393 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 PPP2R2DQ66LE6 453 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 KLHDC8BQ8IXV7 354 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 CLDN22Q8N7P3 220 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 ZFP90Q8TF47 636 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 IRF7Q92985 503 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 LMF2Q9BU23 707 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 TTTY10Q9BZA0 68 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 DMRT3Q9NQL9 472 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GPR37L1O60883 481 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GPX3P22352 226 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 RPS26P62854 115 aaKnown RBP7.22□□□□□ -1.25
SF3B3-201ENST00000302516 HTD2P86397 168 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 TCTE1Q5JU00 501 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 GPR139Q6DWJ6 353 aa7.22□□□□□ -1.25
SF3B3-201ENST00000302516 OR52B6Q8NGF0 335 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms