RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ACAD8Q9UKU7 415 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 KLK4Q9Y5K2 254 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 DSPPQ9NZW4 1301 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 FGF17O60258 216 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 RFX3P48380 749 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 PPM1FP49593 454 aaPredicted RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 TAS2R41P59536 307 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 DUSP5Q16690 384 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 ZC3H14Q6PJT7 736 aaKnown RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 ABI3BPQ7Z7G0 1075 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 FUZQ9BT04 418 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 BARHL1Q9BZE3 327 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 IL21RQ9HBE5 538 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 USP36Q9P275 1121 aaKnown RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 CRNNQ9UBG3 495 aaPredicted RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 IL20RAQ9UHF4 553 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 MGAT4BQ9UQ53 548 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 A0A0G2JPF8 293 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 HMX3A6NHT5 357 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 A8MVJ9 347 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 HNRNPCL2B2RXH8 293 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 HNRNPCL3B7ZW38 293 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 TNFSF14O43557 240 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 CRYZL1O95825 349 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 TP53P04637 393 aaPredicted RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 ALPPP05187 535 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 HNRNPCL4P0DMR1 293 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 SMIM10L1P0DMW3 83 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 HTR2BP41595 481 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 RABIFP47224 123 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 EXOSC7Q15024 291 aaKnown RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 GPR68Q15743 365 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 ASB15Q8WXK1 588 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 SMIM10Q96HG1 83 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 RNF170Q96K19 258 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 ASPNQ9BXN1 380 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 ACTRT3Q9BYD9 372 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 PLA2G12AQ9BZM1 189 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 TTYH1Q9H313 450 aaPredicted RBP20.46■□□□□ 0.87
TPM4-201ENST00000300933 SNTG1Q9NSN8 517 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 SEMA4GQ9NTN9 838 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 CLN6Q9NWW5 311 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 CLEC2DQ9UHP7 191 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 CA14Q9ULX7 337 aa20.46■□□□□ 0.87
TPM4-201ENST00000300933 DMDP11532 3685 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SEC16AO15027 2179 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SPTY2D1-AS1A0A0U1RR47 76 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 TLX2O43763 284 aaPredicted RBP20.45■□□□□ 0.86
TPM4-201ENST00000300933 ICMTO60725 284 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 IL7P13232 177 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SOX3P41225 446 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 TSFMP43897 325 aaKnown RBP20.45■□□□□ 0.86
TPM4-201ENST00000300933 MAZP56270 477 aaKnown RBP20.45■□□□□ 0.86
TPM4-201ENST00000300933 ZNF79Q15937 498 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 ACSM5Q6NUN0 579 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 MFSD12Q6NUT3 480 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 TMPRSS11AQ6ZMR5 421 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 WDR36Q8NI36 951 aaKnown RBP20.45■□□□□ 0.86
TPM4-201ENST00000300933 SERINC2Q96SA4 455 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 CLCA2Q9UQC9 943 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 PCDHGB2Q9Y5G2 931 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 V9GYH0 126 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 A0A087WUU8 490 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 C2orf74A8MZ97 194 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 YES1P07947 543 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 ST6GAL1P15907 406 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 P2RX3P56373 397 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 HHEXQ03014 270 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 MXD1Q05195 221 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 ILKQ13418 452 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 GAS6Q14393 721 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SSX1Q16384 188 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 CLEC12AQ5QGZ9 265 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 KIAA0895LQ68EN5 471 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 PRICKLE2Q7Z3G6 844 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 ATCAYQ86WG3 371 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SLA2Q9H6Q3 261 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 SLC13A4Q9UKG4 626 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 HS3ST3A1Q9Y663 406 aa20.45■□□□□ 0.86
TPM4-201ENST00000300933 A0A1W2PRQ8 180 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 PRKYO43930 277 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 CDC123O75794 336 aaPredicted RBP20.44■□□□□ 0.86
TPM4-201ENST00000300933 CEBPEQ15744 281 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 NKAIN4Q8IVV8 208 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 CAMKVQ8NCB2 501 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 MORN4Q8NDC4 146 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 OR52P1PQ8NH57 321 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 BAHD1Q8TBE0 780 aaPredicted RBP20.44■□□□□ 0.86
TPM4-201ENST00000300933 SPATA5L1Q9BVQ7 753 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 GPR52Q9Y2T5 361 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 SLC22A7Q9Y694 548 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 ZSCAN5BA6NJL1 495 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 NT5EP21589 574 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 YIF1BQ5BJH7 314 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 SIGIRRQ6IA17 410 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 CASP12Q6UXS9 341 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 SLC7A6Q92536 515 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 GSDMCQ9BYG8 508 aa20.44■□□□□ 0.86
TPM4-201ENST00000300933 RERGLQ9H628 205 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms