RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TCEA1P23193 301 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 ELAVL4P26378 380 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 TRHRP34981 398 aaPredicted RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 PGDP52209 483 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 EEF1A1P68104 462 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 LARS2Q15031 903 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 GPR68Q15743 365 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 MINDY4Q4G0A6 757 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 ZNF770Q6IQ21 691 aaPredicted RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 TTC33Q6PID6 262 aaPredicted RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 ZNF836Q6ZNA1 936 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 PRR23CQ6ZRP0 262 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 C8orf59Q8N0T1 100 aaPredicted RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 CLIP4Q8N3C7 705 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 GABARAPL3Q9BY60 117 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 TGIF2Q9GZN2 237 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 RIBC2Q9H4K1 309 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 CACYBPQ9HB71 228 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 KLHL28Q9NXS3 571 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 TRBV4-1A0A0J9YWV2 114 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 CENPVL1A0A0U1RR11 272 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 A0A1W2PRQ8 180 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 LNP1A1A4G5 178 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 SCRG1O75711 98 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 LDOC1O95751 146 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 ONECUT2O95948 504 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 CBLP22681 906 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 ACP1P24666 158 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 ZFP36L1Q07352 338 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 PIN1Q13526 163 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 DGCR6Q14129 220 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 KEAP1Q14145 624 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 PHF19Q5T6S3 580 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 ZNF691Q5VV52 312 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 PWWP2BQ6NUJ5 590 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 FIGNL1Q6PIW4 674 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 NPSR1Q6W5P4 371 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 THAP5Q7Z6K1 395 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 TSPYL5Q86VY4 417 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 TAGAPQ8N103 731 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 SLC38A9Q8NBW4 561 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 LSM14AQ8ND56 463 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 OR9Q2Q8NGE9 314 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 C16orf52Q8NHV5 167 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 NR4A3Q92570 626 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 PRODH2Q9UF12 536 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 KCNE5Q9UJ90 142 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 PCDHGA8Q9Y5G5 932 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 R4GN57 208 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 TRIM64A6NGJ6 449 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 BCKDKO14874 412 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 FLRT2O43155 660 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 GALR2O43603 387 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 FOXD2O60548 495 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 UGT2B17O75795 530 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 IL7RP16871 459 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 CLK3P49761 638 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 ELAVL1Q15717 326 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 MAPK14Q16539 360 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 EIPR1Q53HC9 387 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 TMEM151BQ8IW70 566 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 ZNF786Q8N393 782 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 TSPAN14Q8NG11 270 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 SENP5Q96HI0 755 aaPredicted RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 YTHDF1Q9BYJ9 559 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 SLC7A5P2Q9GIP4 190 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 PNO1Q9NRX1 252 aaKnown RBP14.41□□□□□ -0.1
LSM6-201ENST00000296581 TMCC3Q9ULS5 477 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 POFUT2Q9Y2G5 429 aa14.41□□□□□ -0.1
LSM6-201ENST00000296581 SYNDIG1LA6NDD5 238 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 TRIM64CA6NLI5 447 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 FAAHO00519 579 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 TPST2O60704 377 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 SEC24DO94855 1032 aaPredicted RBP14.4□□□□□ -0.1
LSM6-201ENST00000296581 CT45A8P0DMV1 189 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 CT45A9P0DMV2 189 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 FGF5P12034 268 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 NID1P14543 1247 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 TUBA4AP68366 448 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 IL1RL1Q01638 556 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 NPRL3Q12980 569 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 CT45A2Q5DJT8 189 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 DCST1Q5T197 706 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 PLPP5Q8NEB5 264 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 PITX2Q99697 317 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 NIPSNAP1Q9BPW8 284 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 FNDC11Q9BVV2 318 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 VN1R1Q9GZP7 353 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 SIAEQ9HAT2 523 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 MAN2C1Q9NTJ4 1040 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 OCIAD1Q9NX40 245 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 CTSFQ9UBX1 484 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 NDRG4Q9ULP0 352 aaKnown RBP14.4□□□□□ -0.1
LSM6-201ENST00000296581 NOTOA8MTQ0 251 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 HBQ1P09105 142 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 RYKP34925 604 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 SLC37A1P57057 533 aa14.4□□□□□ -0.1
LSM6-201ENST00000296581 SEC23BQ15437 767 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms