RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZNF28P17035 718 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 PPICP45877 212 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 PDZK1Q5T2W1 519 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 NR4A3Q92570 626 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 DIO2Q92813 273 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 GTPBP3Q969Y2 492 aaKnown RBP21.14■□□□□ 0.97
PTX3-201ENST00000295927 MCHR1Q99705 422 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 NTNG1Q9Y2I2 539 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 SH3PXD2BA1X283 911 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 VSTM2BA6NLU5 285 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 PRR33A8MZF0 331 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 CCKBRP32239 447 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 ZNF136P52737 540 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 SPEM2Q0P670 501 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 IL18R1Q13478 541 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 KEAP1Q14145 624 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 CCDC157Q569K6 752 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 ENTPD8Q5MY95 495 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 PODNL1Q6PEZ8 512 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 TMEM9BQ9NQ34 198 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 SEMA4GQ9NTN9 838 aa21.13■□□□□ 0.97
PTX3-201ENST00000295927 OR10H3O60404 316 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 CBFA2T3O75081 653 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 RAPSNQ13702 412 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ING2Q9H160 280 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 NXF5Q9H1B4 397 aaKnown RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 AKIRIN1Q9H9L7 192 aaPredicted RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 NDRG4Q9ULP0 352 aaKnown RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 PCDHGA10Q9Y5H3 936 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 CACNA1HO95180 2353 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 E9PQ18 207 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 CNOT3O75175 753 aaKnown RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 BCAS1O75363 584 aaPredicted RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 GTF2A1P52655 376 aaPredicted RBP21.12■□□□□ 0.97
PTX3-201ENST00000295927 PLEKHM3Q6ZWE6 761 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ANKRD37Q7Z713 158 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ZNF614Q8N883 585 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 MORN4Q8NDC4 146 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 OR1N1Q8NGS0 311 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ADAMTS16Q8TE57 1224 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 PMEPA1Q969W9 287 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ADIPOR1Q96A54 375 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 LMF1Q96S06 567 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 ARMC7Q9H6L4 198 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 COPS7AQ9UBW8 275 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 GMPPBQ9Y5P6 360 aa21.12■□□□□ 0.97
PTX3-201ENST00000295927 NPIPB9F8W1W9 429 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 ALOX12BO75342 701 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 CYP7B1O75881 506 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 GKN3PP0CG01 181 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 PRG2P13727 222 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 AGXTP21549 392 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 ELK4P28324 431 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 ISL1P61371 349 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 RPP38P78345 283 aaKnown RBP21.11■□□□□ 0.97
PTX3-201ENST00000295927 PLAURQ03405 335 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 ZNF141Q15928 474 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTX3-201ENST00000295927 LCORQ96JN0 433 aaPredicted RBP21.11■□□□□ 0.97
PTX3-201ENST00000295927 SLC26A1Q9H2B4 701 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 SLC39A1Q9NY26 324 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 MGAT4BQ9UQ53 548 aa21.11■□□□□ 0.97
PTX3-201ENST00000295927 IGHV3-20A0A0C4DH32 117 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 C2orf92A0A1B0GVN3 265 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 DPPA5A6NC42 116 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 A6NHS1 94 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 ADAP00813 363 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 DRD5P21918 477 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 IFNA8P32881 189 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 RYKP34925 604 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 RPS6KA3P51812 740 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 ATP12AP54707 1039 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 EMP2P54851 167 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 CD47Q08722 323 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 ST3GAL3Q11203 375 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 TRAM2Q15035 370 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 EBPQ15125 230 aaKnown RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 DECR1Q16698 335 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 PGBD2Q6P3X8 592 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 RANBP3LQ86VV4 465 aaPredicted RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 C9orf40Q8IXQ3 194 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 GAL3ST4Q96RP7 486 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 SPSB2Q99619 263 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 PITX2Q99697 317 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 CMKLR1Q99788 373 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 MESP1Q9BRJ9 268 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 FRG2CA6NGY1 282 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 TNFRSF10AO00220 468 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 MEP1AQ16819 746 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 CTU2Q2VPK5 515 aaKnown RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 KCTD21Q4G0X4 260 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 MRPL14Q6P1L8 145 aaKnown RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 KLHL17Q6TDP4 642 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 PARP8Q8N3A8 854 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 TSPAN14Q8NG11 270 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 OR4K5Q8NGD3 323 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 METTL21AQ8WXB1 218 aa21.1■□□□□ 0.97
PTX3-201ENST00000295927 CNOT9Q92600 299 aaKnown RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 EFHD2Q96C19 240 aaPredicted RBP21.1■□□□□ 0.97
PTX3-201ENST00000295927 B4E171 279 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms