RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CNN2Q99439 309 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ACSL5Q9ULC5 683 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MYO16Q9Y6X6 1858 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 F8W036 122 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 SORBS2O94875 1100 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 SP9P0CG40 484 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ETFAP13804 333 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 DRD2P14416 443 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 TUBG1P23258 451 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ACRV1P26436 265 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 AK4P27144 223 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ALDH3B2P48448 385 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 LRP8Q14114 963 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 MICAQ29983 383 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 FLYWCH1Q4VC44 716 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CCDC116Q8IYX3 515 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4C15Q8NGM1 316 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR6N1Q8NGY5 312 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CMKLR1Q99788 373 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 PPA2Q9H2U2 334 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 GSTO2Q9H4Y5 243 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZFP57Q9NU63 452 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 DCAF13Q9NV06 445 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 SCAMP1O15126 338 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 DNAJB6O75190 326 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 IFNA5P01569 189 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 TFP02787 698 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARSDP51689 593 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF252P-AS1Q0IIN9 211 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 TBCEQ15813 527 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 KCNJ8Q15842 424 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ENPP7Q6UWV6 458 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARL14Q8N4G2 192 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 NUP43Q8NFH3 380 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR5T2Q8NGG2 359 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR52P1PQ8NH57 321 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 KLK6Q92876 244 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 AP1S3Q96PC3 154 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF649Q9BS31 505 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 IGSF5Q9NSI5 407 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CLEC4EQ9ULY5 219 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 PCDHGA8Q9Y5G5 932 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CFAP20Q9Y6A4 193 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 A0A1W2PPK0 400 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 LDB2O43679 373 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ENDOUP21128 410 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 AGXTP21549 392 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 DRD5P21918 477 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPX3P22352 226 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CRHBPP24387 322 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD34P28906 385 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 GGT2P36268 569 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 KIR2DL1P43626 348 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 HTR6P50406 440 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ERVPABLB-1P60509 514 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 MRPS10P82664 201 aaKnown RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 PAGE3Q5JUK9 113 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 LAIR1Q6GTX8 287 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 RANBP10Q6VN20 620 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 GALNT11Q8NCW6 608 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 PROKR1Q8TCW9 393 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 NETO1Q8TDF5 533 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 MEPEQ9NQ76 525 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ABI3Q9P2A4 366 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
SYNGAP1-201ENST00000293748 ITGAMP11215 1152 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GMPRP36959 345 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TUBB3Q13509 450 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF805Q5CZA5 627 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 MANEALQ5VSG8 457 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 METTL2BQ6P1Q9 378 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PGM2L1Q6PCE3 622 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 JSRP1Q96MG2 331 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 DPYSL5Q9BPU6 564 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 MMP28Q9H239 520 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GORASP2Q9H8Y8 452 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 VNN3Q9NY84 501 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 WASF3Q9UPY6 502 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 A0A1W2PP55 124 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 C1orf226A1L170 272 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 GLOD5A6NK44 160 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 B8ZZF3 427 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 H3BSH0 61 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 H7BY64 318 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 FARS2O95363 451 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 HOXA6P31267 233 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 PSAPL1Q6NUJ1 521 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 TSSK4Q6SA08 328 aa11.16□□□□□ -0.62
SYNGAP1-201ENST00000293748 DTX3Q8N9I9 347 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms