RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TM4SF5O14894 197 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 CHST10O43529 356 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PTHP01270 115 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 CKMT1AP12532 417 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 CPMP14384 443 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 ELAVL4P26378 380 aaKnown RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 UGT2B15P54855 530 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 RPS3AP61247 264 aaKnown RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 SHC2P98077 582 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 DAB2P98082 770 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF45Q02386 682 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PRKCDQ05655 676 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 GANABQ14697 944 aaKnown RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 DCST1Q5T197 706 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 AGAP7PQ5VUJ5 663 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PRAMEF8Q5VWM4 474 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PRAMEF7Q5VXH5 474 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 C12orf73Q69YU5 71 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 TNFAIP8L2Q6P589 184 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 CD300LDQ6UXZ3 194 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PRSS41Q7RTY9 318 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 KRT73Q86Y46 540 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF595Q8IYB9 648 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 OR4D9Q8NGE8 314 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 ELP4Q96EB1 424 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 FUZQ9BT04 418 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 SPATA5L1Q9BVQ7 753 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 SP140LQ9H930 580 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 SLC25A19Q9HC21 320 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 ZBTB20Q9HC78 741 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PTGFRNQ9P2B2 879 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 REV1Q9UBZ9 1251 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 PCDHGB2Q9Y5G2 931 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 GPC6Q9Y625 555 aaPredicted RBP15.66■□□□□ 0.1
CPSF4-201ENST00000292476 A0A0A6YYC8 382 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-201ENST00000292476 AGAP5A6NIR3 686 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 DUXAA6NLW8 204 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 I3L1I5 382 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-201ENST00000292476 RDH16O75452 317 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 SOX30O94993 753 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 AGR2O95994 175 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 ATP1B1P05026 303 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 C8orf89P0DMQ9 161 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 CSF2RBP32927 897 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 SEPHS1P49903 392 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 NUDT6P53370 316 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 SIM1P81133 766 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-201ENST00000292476 RHAGQ02094 409 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 ACY1Q03154 408 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 CFHR1Q03591 330 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 CDC20Q12834 499 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 COX10Q12887 443 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 MAPK11Q15759 364 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 TCTN3Q6NUS6 607 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 GUSBP11Q6P575 273 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 SZRD1Q7Z422 152 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 BBS10Q8TAM1 723 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 NR4A3Q92570 626 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 SIAEQ9HAT2 523 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 BCL2L10Q9HD36 194 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 NTMQ9P121 344 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 IFT52Q9Y366 437 aa15.65■□□□□ 0.1
CPSF4-201ENST00000292476 TRBV4-1A0A0J9YWV2 114 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 A0A1W2PRQ8 180 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 TMEM150CB9EJG8 249 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 BOLA2-SMG1P6H3BVE0 249 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 FOXS1O43638 330 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 ASNA1O43681 348 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 UPK1BO75841 260 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 ETV6P41212 452 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 IFITM3Q01628 133 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 CYP27C1Q4G0S4 372 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 RPS26P11Q5JNZ5 115 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-201ENST00000292476 SNAP47Q5SQN1 464 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 GDPGP1Q6ZNW5 385 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 MMABQ96EY8 250 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-201ENST00000292476 NDC1Q9BTX1 674 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 LRRN3Q9H3W5 708 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 AMBNQ9NP70 447 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 CUTCQ9NTM9 273 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 SEC14L3Q9UDX4 400 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 CFL2Q9Y281 166 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 PEX16Q9Y5Y5 336 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 CABIN1Q9Y6J0 2220 aa15.64■□□□□ 0.09
CPSF4-201ENST00000292476 LY6G6EA0A0G2JKS1 128 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 WASHC1A8K0Z3 465 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CCRL2O00421 344 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 B4GALT2O60909 372 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CD59P13987 128 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 ENDOUP21128 410 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 NCF4Q15080 339 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 OCLNQ16625 522 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 PERM1Q5SV97 790 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SLC25A30Q5SVS4 291 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 TMEM107Q6UX40 140 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 ZBTB8BQ8NAP8 495 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 DEFB124Q8NES8 71 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 NUP43Q8NFH3 380 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 OR5T3Q8NGG3 340 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 OR9A2Q8NGT5 310 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms