RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 KIR2DL2P43627 348 aaPredicted RBP22.73■■□□□ 1.23
U2AF1-201ENST00000291552 DIO3P55073 304 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 PRR5P85299 388 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 BTLAQ7Z6A9 289 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 MEIOBQ8N635 442 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 BANPQ8N9N5 519 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 NUP43Q8NFH3 380 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 PPCDCQ96CD2 204 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 ZNF845Q96IR2 970 aaPredicted RBP22.73■■□□□ 1.23
U2AF1-201ENST00000291552 YIPF4Q9BSR8 244 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 PINK1Q9BXM7 581 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 TBL1XR1Q9BZK7 514 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 ANKZF1Q9H8Y5 726 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 SLC17A7Q9P2U7 560 aa22.73■■□□□ 1.23
U2AF1-201ENST00000291552 MRTO4Q9UKD2 239 aaKnown RBP22.73■■□□□ 1.23
U2AF1-201ENST00000291552 HEATR5AQ86XA9 2040 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 PRR14LQ5THK1 2151 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 H3BML4 177 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 GMFGO60234 142 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 RAF1P04049 648 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 BCKDHAP12694 445 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 KLK2P20151 261 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 ALDH3A1P30838 453 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 CCKARP32238 428 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 GPC1P35052 558 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 PSMD4P55036 377 aaKnown RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 EEF1A1P68104 462 aaKnown RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 EXOSC6Q5RKV6 272 aaKnown RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 EEF1A1P5Q5VTE0 462 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 FBXW10Q5XX13 1052 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 ZNF474Q6S9Z5 364 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 TRABD2AQ86V40 505 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 CNEP1R1Q8N9A8 125 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 CHDHQ8NE62 594 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 FNDC9Q8TBE3 224 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 GPR151Q8TDV0 419 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 TWIST2Q8WVJ9 160 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 ZBED6CLQ96FA7 236 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 NPAS1Q99742 590 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 KLHDC3Q9BQ90 382 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 PIGQQ9BRB3 760 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 OPN3Q9H1Y3 402 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-201ENST00000291552 PTGES2Q9H7Z7 377 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 C3orf14Q9HBI5 128 aa22.72■■□□□ 1.23
U2AF1-201ENST00000291552 NAV3Q8IVL0 2385 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 PIP5K1BO14986 540 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SIAH2O43255 324 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 DIAPH2O60879 1101 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 TNFRSF21O75509 655 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SMNDC1O75940 238 aaKnown RBP eCLIP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 KCNH1O95259 989 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 OXSR1O95747 527 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ARRB2P32121 409 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 PRKAG1P54619 331 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SIRPAP78324 504 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 FAM27E3Q08E93 113 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 FOXD4Q12950 439 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 GUSBP1Q15486 140 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 DUSP5Q16690 384 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 GALNTL6Q49A17 601 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 GLYR1Q49A26 553 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 OR2A2Q6IF42 318 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 MFSD12Q6NUT3 480 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 GGNQ86UU5 652 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SLC16A11Q8NCK7 471 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 OR4C3Q8NH37 302 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ZFP28Q8NHY6 868 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 FAM110BQ8TC76 370 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 OTUB1Q96FW1 271 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 MS4A4EQ96PG1 132 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 FAM111AQ96PZ2 611 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 RNF122Q9H9V4 155 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SIRT3Q9NTG7 399 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ACSS1Q9NUB1 689 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-201ENST00000291552 FBXO34Q9NWN3 711 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 SH3BP4Q9P0V3 963 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ZNF175Q9Y473 711 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ROS1P08922 2347 aa22.71■■□□□ 1.23
U2AF1-201ENST00000291552 ARID1AO14497 2285 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 TLDC2A0PJX2 215 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 ALG1L2C9J202 215 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 LINC01387J3KSC0 135 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 NPHS1O60500 1241 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 CGAP01215 116 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 FGF4P08620 206 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 CLK3P49761 638 aaKnown RBP22.7■■□□□ 1.22
U2AF1-201ENST00000291552 MANFP55145 182 aaKnown RBP22.7■■□□□ 1.22
U2AF1-201ENST00000291552 C17orf67Q0P5P2 114 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 ARL13AQ5H913 290 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-201ENST00000291552 CHMP1BQ7LBR1 199 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 CAMKMTQ7Z624 323 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 METTL25Q8N6Q8 603 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 CDRT4Q8N9R6 151 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 SMPDL3BQ92485 455 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 SLC9A6Q92581 669 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 C16orf58Q96GQ5 468 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 DLL4Q9NR61 685 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 TMED5Q9Y3A6 229 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 TRAF6Q9Y4K3 522 aa22.7■■□□□ 1.22
U2AF1-201ENST00000291552 RAI1Q7Z5J4 1906 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms