RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KCNJ5P48544 419 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 YPEL5P62699 121 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TDGQ13569 410 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 KIAA0895LQ68EN5 471 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 OLIG3Q7RTU3 272 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 PAQR7Q86WK9 346 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TTLQ8NG68 377 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF582Q96NG8 517 aaPredicted RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 SOSTQ9BQB4 213 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 GLIPR2Q9H4G4 154 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 MRPS18AQ9NVS2 196 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 SF3B6Q9Y3B4 125 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SOX1O00570 391 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 CCNYL3P0C7X3 344 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 THEGLP0DJG4 465 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 PRKAR1AP10644 381 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 FGF9P31371 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 HTR2BP41595 481 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 P2RX3P56373 397 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 PPP1CAP62136 330 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC9A5Q14940 896 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 LINC00471Q8N535 108 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 IQCF1Q8N6M8 205 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 NATD1Q8N6N6 113 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 OR2L5Q8NG80 312 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM163Q8TC26 289 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC7A13Q8TCU3 470 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 OR5P2Q8WZ92 322 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 C1GALT1C1Q96EU7 318 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 LRR1Q96L50 414 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 FGF20Q9NP95 211 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 WSB2Q9NYS7 404 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 ASB4Q9Y574 426 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 HS3ST3A1Q9Y663 406 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 ALG5Q9Y673 324 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 NINQ8N4C6 2090 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 NME6O75414 186 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 RPS25P62851 125 aaKnown RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 GPLD1P80108 840 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 RAB40BQ12829 278 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 FBXO42Q6P3S6 717 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 C6orf120Q7Z4R8 191 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 MFSD9Q8NBP5 474 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 UFD1Q92890 307 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF607Q96SK3 696 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 RSPO3Q9BXY4 272 aaPredicted RBP17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SERHL2Q9H4I8 314 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 PPP1R3EQ9H7J1 279 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 GIMAP4Q9NUV9 329 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 ING3Q9NXR8 418 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 ADAM29Q9UKF5 820 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 SCN2AQ99250 2005 aa17.11■□□□□ 0.33
PDLIM3-201ENST00000284767 DNAJB6O75190 326 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 AIFM1O95831 613 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 UGT2B7P16662 529 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 NDUFS1P28331 727 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 SSTR4P31391 388 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 GABRA5P31644 462 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 AHRP35869 848 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 FZD2Q14332 565 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 CRTC2Q53ET0 693 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 UBE2J2Q8N2K1 259 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 Q8N402 240 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 NLGN4YQ8NFZ3 816 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 OR5D16Q8NGK9 328 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 OR52P1PQ8NH57 321 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 FGF11Q92914 225 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 FOXQ1Q9C009 403 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 DIABLOQ9NR28 239 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 A0A0G2JMP0 313 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 A0A1W2PRQ8 180 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 SNTNA6NMZ2 147 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 P2RX6O15547 441 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 TNFP01375 233 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 ACP2P11117 423 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 FRKP42685 505 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 RABIFP47224 123 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 LSSP48449 732 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 GAS1P54826 345 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 BTN3A2P78410 334 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 EFNB1P98172 346 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 GINS1Q14691 196 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM35AQ53FP2 167 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 PAMR1Q6UXH9 720 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 RBM45Q8IUH3 476 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 ZCCHC10Q8TBK6 192 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC37A2Q8TED4 501 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 CNRIP1Q96F85 164 aaPredicted RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 GTPBP2Q9BX10 602 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 NEUROD4Q9HD90 331 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM74BQ9NUR3 256 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 EVA1BQ9NVM1 165 aa17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 TMA7Q9Y2S6 64 aaKnown RBP17.1■□□□□ 0.33
PDLIM3-201ENST00000284767 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF888P0CJ79 500 aaPredicted RBP17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 PSKH1P11801 424 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 MAOBP27338 520 aa17.09■□□□□ 0.33
PDLIM3-201ENST00000284767 APEX1P27695 318 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms