RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 APOC3P02656 99 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 FGF4P08620 206 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 T-ENOLP0DO92 83 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 IL7P13232 177 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 GPX3P22352 226 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 ERVK-25P63136 954 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 NKX3-2P78367 333 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 TRAPPC6BQ86SZ2 158 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 FKBP10Q96AY3 582 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 FAM183AA6NL82 134 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 CD79AP11912 226 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 ITGB7P26010 798 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 SGSHP51688 502 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 NADSYN1Q6IA69 706 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 SLC35F2Q8IXU6 374 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 FAM53CQ9NYF3 392 aa10.82□□□□□ -0.68
USP53-201ENST00000274030 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 IFNGR1P15260 489 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 EFR3AQ14156 821 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 IRF4Q15306 451 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 TMEFF1Q8IYR6 380 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 SFXN2Q96NB2 322 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 ZNF300Q96RE9 604 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 VSX1Q9NZR4 365 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 ADAMTS5Q9UNA0 930 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 CRTAPO75718 401 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 MPIG6BO95866 241 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 ZNF140P52738 457 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 EMP2P54851 167 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 OR7A5Q15622 319 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 CHCHD4Q8N4Q1 142 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 GPR150Q8NGU9 434 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 TMEM239Q8WW34 195 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 TSNAXQ99598 290 aaKnown RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 TRIM64CA6NLI5 447 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 DNAJB5O75953 348 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 PNMTP11086 282 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 GABARAPL2P60520 117 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 CBARPQ8N350 705 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP53-201ENST00000274030 OR52R1Q8NGF1 315 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 DTD2Q96FN9 168 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 OR51E2Q9H255 320 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 RANBP3Q9H6Z4 567 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 ZNF334Q9HCZ1 680 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 CD93Q9NPY3 652 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 TRAV27A0A087WT01 109 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 H7C2Y5 167 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 RPS17P08708 135 aaKnown RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 GSCP56915 257 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 CSNK2A1P68400 391 aaPredicted RBP10.81□□□□□ -0.68
USP53-201ENST00000274030 PNCKQ6P2M8 343 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 CSNK2A3Q8NEV1 391 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 RDH14Q9HBH5 336 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 SLAMF8Q9P0V8 285 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 KNL1Q8NG31 2342 aa10.81□□□□□ -0.68
USP53-201ENST00000274030 HLA-FP30511 346 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 CASP6P55212 293 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PPA1Q15181 289 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 STK11Q15831 433 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 CDKN3Q16667 212 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PCGF3Q3KNV8 242 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ANKRD13BQ86YJ7 626 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 OR51T1Q8NGJ9 327 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 OR5H2Q8NGV7 314 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ZNF480Q8WV37 535 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 HEBP1Q9NRV9 189 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 SH3BGRL2Q9UJC5 107 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ACAD8Q9UKU7 415 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 EMCNQ9ULC0 261 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PTRH2Q9Y3E5 179 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 LRRTM2O43300 516 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PRKYO43930 277 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 RETP07949 1114 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 SYPP08247 313 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 DHRS4L1P0CG22 281 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 IRF2P14316 349 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ETV5P41161 510 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 AQP2P41181 271 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 GLYATL2Q8WU03 294 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 BMFQ96LC9 184 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ST6GALNAC5Q9BVH7 336 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 HOXD1Q9GZZ0 328 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 RGCCQ9H4X1 137 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 ACOT13Q9NPJ3 140 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 TMEM181Q9P2C4 612 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 HSPE1-MOB4S4R3N1 261 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 RGPD8O14715 1765 aaPredicted RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 MYO18AQ92614 2054 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 DRGXA6NNA5 263 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 EIF3FO00303 357 aaPredicted RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 NUDT21O43809 227 aaKnown RBP10.8□□□□□ -0.68
USP53-201ENST00000274030 BMP4P12644 408 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 NPR2P20594 1047 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 CD34P28906 385 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 WNT4P56705 351 aa10.8□□□□□ -0.68
USP53-201ENST00000274030 DPPA4Q7L190 304 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms