RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 GCM2O75603 506 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-201ENST00000265304 SLC25A12O75746 678 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 SNX4O95219 450 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 H6PDO95479 791 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CHRM4P08173 479 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CCL3P10147 92 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 HSD17B1P14061 328 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CD46P15529 392 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CNR1P21554 472 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 KRT20P35900 424 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CPA2P48052 419 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CASP9P55211 416 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 ARG2P78540 354 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CDK6Q00534 326 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 FOXO1Q12778 655 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 INAQ16352 499 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 SYPL1Q16563 259 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 VMACQ2NL98 169 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 GCNT6Q5T4J0 391 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 FNDC7Q5VTL7 733 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 REEP3Q6NUK4 255 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 SLC30A6Q6NXT4 461 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 FIGNL1Q6PIW4 674 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 C16orf89Q6UX73 402 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 APOOLQ6UXV4 268 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 C16orf62Q7Z3J2 963 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 C11orf65Q8NCR3 313 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 OR10A6Q8NH74 314 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-201ENST00000265304 OTUB1Q96FW1 271 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-201ENST00000265304 NODALQ96S42 347 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 TRIM8Q9BZR9 551 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 B3GNT3Q9Y2A9 372 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 WDR45Q9Y484 360 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 CSAG2Q9Y5P2 127 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 FAM220BPB1ANY3 271 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 HS6ST1O60243 411 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ICOSLGO75144 302 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 UGT2B17O75795 530 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 PGM3O95394 542 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 UTS2O95399 124 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 NR2F1P10589 423 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ENDOUP21128 410 aaKnown RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 IL12BP29460 328 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 PCGF2P35227 344 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 SLC7A2P52569 658 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 CRISP3P54108 245 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 SLC25A3Q00325 362 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 CHRNEQ04844 493 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF169Q14929 603 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 GRAMD1BQ3KR37 738 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF766Q5HY98 468 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 CCNJQ5T5M9 372 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZFP62Q8NB50 900 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 HIPK4Q8NE63 616 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 GRHL3Q8TE85 626 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 MAL2Q969L2 176 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 ZG16BQ96DA0 208 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 RSPO3Q9BXY4 272 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 KLF13Q9Y2Y9 288 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-201ENST00000265304 MED12Q93074 2177 aa13.07□□□□□ -0.32
SSBP1-201ENST00000265304 PRORSD1PA6NEY8 169 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 OXSR1O95747 527 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-201ENST00000265304 THBS1P07996 1170 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 ATP6V1C1P21283 382 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 HTR1EP28566 365 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 EVI2BP34910 448 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 GSK3BP49841 420 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 LIPEQ05469 1076 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 PLEKHN1Q494U1 663 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-201ENST00000265304 SLC6A19Q695T7 634 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 PGM2L1Q6PCE3 622 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 PTRH1Q86Y79 214 aaKnown RBP13.06□□□□□ -0.32
SSBP1-201ENST00000265304 MISPQ8IVT2 679 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 CMIPQ8IY22 773 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 Q8NA96 180 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 FAM13CQ8NE31 585 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 FAM71CQ8NEG0 241 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 BBS10Q8TAM1 723 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 TMEM41AQ96HV5 264 aa13.06□□□□□ -0.32
SSBP1-201ENST00000265304 FAM173AQ9BQD7 235 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms