RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 KCNJ5P48544 419 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ARHGDIBP52566 201 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 PCBP3P57721 371 aaKnown RBP12.3□□□□□ -0.44
NUP54-201ENST00000264883 EEF1A2Q05639 463 aaKnown RBP12.3□□□□□ -0.44
NUP54-201ENST00000264883 ZNF763Q0D2J5 394 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ATP13A5Q4VNC0 1218 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ZNF485Q8NCK3 441 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
NUP54-201ENST00000264883 YIPF4Q9BSR8 244 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 C1GALT1Q9NS00 363 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 PLXNB3Q9ULL4 1909 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 DVL2O14641 736 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 MID1O15344 667 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 EFCAB14O75071 495 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 RASGRP1O95267 797 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 SNAPINO95295 136 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ANKRD34CP0C6C1 535 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 GABRA1P14867 456 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 PPP3CBP16298 524 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 CAPZA2P47755 286 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 MTNR1AP48039 350 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 MTNR1BP49286 362 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 DGKGP49619 791 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 HTR4Q13639 388 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 SWI5Q1ZZU3 235 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ACSM5Q6NUN0 579 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 TMUB2Q71RG4 321 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 ASZ1Q8WWH4 475 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 MTERF1Q99551 399 aaKnown RBP12.3□□□□□ -0.44
NUP54-201ENST00000264883 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
NUP54-201ENST00000264883 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
NUP54-201ENST00000264883 GNG14A0A1W2PPG7 69 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 GSAPA4D1B5 854 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 GNB5O14775 395 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 PRODHO43272 600 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 CHST10O43529 356 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 GPR37L1O60883 481 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 FZD7O75084 574 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 OLFM2O95897 454 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 HPP00738 406 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 URODP06132 367 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SLC1A3P43003 542 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 DGCR2P98153 550 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SNTB2Q13425 540 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 PDE7AQ13946 482 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 FGL2Q14314 439 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SLC22A10Q63ZE4 541 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SLC8B1Q6J4K2 584 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 OR2AP1Q8NGE2 309 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 LCORQ96JN0 433 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 TEFMQ96QE5 360 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 TMPRSS13Q9BYE2 586 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SEMA4CQ9C0C4 833 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 ATG10Q9H0Y0 220 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 WDR26Q9H7D7 661 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 NPDC1Q9NQX5 325 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 PTGFRNQ9P2B2 879 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 ACSL6Q9UKU0 697 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 RASD1Q9Y272 281 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 ARHGEF33A8MVX0 844 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 E7EQ34 232 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 ZNF197O14709 1029 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 KIAA0355O15063 1070 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 PRAF2O60831 178 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 NFATC1O95644 943 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 WNT1P04628 370 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 GIPP09681 153 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 HMGA1P17096 107 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 THBS2P35442 1172 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 GIPRP48546 466 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SMIM11AP58511 58 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 HBA1P69905 142 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 SLC36A4Q6YBV0 504 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 DNAJB7Q7Z6W7 309 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 TSPAN33Q86UF1 283 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 CAMKVQ8NCB2 501 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 OR1M1Q8NGA1 313 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 OR6K2Q8NGY2 324 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 FGF11Q92914 225 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 ECHDC3Q96DC8 303 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 ZFP3Q96NJ6 502 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 FN3KQ9H479 309 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 MRTO4Q9UKD2 239 aaKnown RBP12.29□□□□□ -0.44
NUP54-201ENST00000264883 FLVCR2Q9UPI3 526 aa12.29□□□□□ -0.44
NUP54-201ENST00000264883 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms