RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 EDNRAP25101 427 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ITGB7P26010 798 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 NTSP30990 170 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 CBSP35520 551 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 CAMK2DQ13557 499 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 TDGQ13569 410 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 C3orf38Q5JPI3 329 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 METTL11BQ5VVY1 283 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 HBMQ6B0K9 141 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 TMEM17Q86X19 198 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 APCDD1Q8J025 514 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 FCAMRQ8WWV6 532 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 SORCS1Q8WY21 1168 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 NKD1Q969G9 470 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 SENP5Q96HI0 755 aaPredicted RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 ABHD14A-ACY1A0A1B0GW23 586 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 F2P00734 622 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 PIPP12273 146 aaPredicted RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 CCDC116Q8IYX3 515 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 CASTOR1Q8WTX7 329 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 ECHDC3Q96DC8 303 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 TMEM231Q9H6L2 316 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
GPC1-201ENST00000264039 FARSAQ9Y285 508 aaKnown RBP15.3■□□□□ 0.04
GPC1-201ENST00000264039 A0A1B0GVT2 93 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 SLC22A23A1A5C7 686 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 MTMR11A4FU01 709 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PRAMEF25A6NGN4 478 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ATG13O75143 517 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 IGHA2P01877 340 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 WNT1P04628 370 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 CKBP12277 381 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PSMB10P40306 273 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 AP1S1P61966 158 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 CCL14Q16627 93 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 Q6ZTK2 550 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 NDUFAF7Q7L592 441 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 C12orf45Q8N5I9 185 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 ARL14EPQ8N8R7 260 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 ZBED3Q96IU2 234 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 RIOK2Q9BVS4 552 aaKnown RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 POLDIP3Q9BY77 421 aaKnown RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 UQCRC2P22695 453 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PRMT2P55345 433 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 TBPL1P62380 186 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ZDHHC20Q5W0Z9 365 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 TMEM91Q6ZNR0 172 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 OR4C15Q8NGM1 316 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 CNOT9Q92600 299 aaKnown RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 SEC22AQ96IW7 307 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 C4orf36Q96KX1 117 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 MACROD1Q9BQ69 325 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 BHLHE41Q9C0J9 482 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 SLC6A20Q9NP91 592 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 C1GALT1Q9NS00 363 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 BABAM2Q9NXR7 383 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 B4GALT6Q9UBX8 382 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ENTPD4Q9Y227 616 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 DNAJC25-GNG10A0A024R161 153 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 OR1F1O43749 312 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PRAMEF4O60810 478 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 APOC1P02654 83 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ADRB1P08588 477 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 LIMS3P0CW19 117 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 LIMS4P0CW20 117 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ACP5P13686 325 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 ACHEP22303 614 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 CRYBA2P53672 197 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PRAMEF9Q5VWM5 478 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 FOXRED2Q8IWF2 684 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 OR2T4Q8NH00 348 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 TBC1D20Q96BZ9 403 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 TCEAL4Q96EI5 215 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 PINK1Q9BXM7 581 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 NKX6-2Q9C056 277 aaPredicted RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 GPR160Q9UJ42 338 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 NOP16Q9Y3C1 178 aaKnown RBP15.29■□□□□ 0.04
GPC1-201ENST00000264039 ASB4Q9Y574 426 aa15.29■□□□□ 0.04
GPC1-201ENST00000264039 FFAR1O14842 300 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 RNF13O43567 381 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 FBXO45P0C2W1 286 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TRIM23P36406 574 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TGM3Q08188 693 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TPBGQ13641 420 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 CRTC1Q6UUV9 634 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PAQR7Q86WK9 346 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 GRHL3Q8TE85 626 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 ASB11Q8WXH4 323 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PELOQ9BRX2 385 aaKnown RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 RNF32Q9H0A6 362 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TMEM168Q9H0V1 697 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 SLITRK2Q9H156 845 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 C14orf105Q9NVL8 296 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms