RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ALG10Q5BKT4 473 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 SPARTQ8N0X7 666 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 MFSD9Q8NBP5 474 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 DHRS1Q96LJ7 313 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
CDH3-201ENST00000264012 ERVK13-1Q9NX77 482 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 BCAS1O75363 584 aaPredicted RBP13.16□□□□□ -0.3
CDH3-201ENST00000264012 GLP1RP43220 463 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 E2F1Q01094 437 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ACVR1Q04771 509 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ADAMTS16Q8TE57 1224 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ASB15Q8WXK1 588 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 PGAM5Q96HS1 289 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ATG5Q9H1Y0 275 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 H3BMQ9 156 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 MTHFD2P13995 350 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 MFSD13AQ14CX5 517 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ZNF77Q15935 545 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 SPIN3Q5JUX0 258 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 LHX8Q68G74 356 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ABHD11Q8NFV4 315 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 COG8Q96MW5 612 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 KIAA1551Q9HCM1 1747 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 LRIT1Q9P2V4 623 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 PHYHO14832 338 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 CR2P20023 1033 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 VRK2Q86Y07 508 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 NXPE3Q969Y0 559 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
CDH3-201ENST00000264012 PITX2Q99697 317 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 NUDT15Q9NV35 164 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
CDH3-201ENST00000264012 NOTOA8MTQ0 251 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 HOXC11O43248 304 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 ITGAMP11215 1152 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 GTF2F2P13984 249 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 SLC6A8P48029 635 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 CCSMST1Q4G0I0 132 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 TMEM52BQ4KMG9 183 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PIP5KL1Q5T9C9 394 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 ANKRD54Q6NXT1 300 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PELI3Q8N2H9 469 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 C14orf166Q9Y224 244 aaKnown RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 FAM171A2A8MVW0 826 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 DGLUCYQ7Z3D6 616 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 CASTOR1Q8WTX7 329 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 BPIFA2Q96DR5 249 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 ALG8Q9BVK2 526 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 TEX10Q9NXF1 929 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 SPEF1Q9Y4P9 236 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 C13orf42A0A1B0GVH6 325 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 IFNA7P01567 189 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 UBL4AP11441 157 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 UGT2B7P16662 529 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 RAB3BP20337 219 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PSMA6P60900 246 aaKnown RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 TUBB3Q13509 450 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 BCL7AQ4VC05 210 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 AFMIDQ63HM1 303 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 SLC25A25Q6KCM7 469 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 MCOLN1Q9GZU1 580 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 TUBB1Q9H4B7 451 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 LRRTM2O43300 516 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 HSPA12AO43301 675 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
CDH3-201ENST00000264012 ASB16Q96NS5 453 aa13.15□□□□□ -0.3
CDH3-201ENST00000264012 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms