RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SCO2O43819 266 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 RASAL1O95294 804 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 CASP3P42574 277 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 CRATP43155 626 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 MTPNP58546 118 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 ACTR3P61158 418 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 CYLC2Q14093 348 aaPredicted RBP16.8■□□□□ 0.28
SDF4-201ENST00000263741 SELPLGQ14242 412 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 MAPRE2Q15555 327 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 GRAMD1BQ3KR37 738 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 RNFT1Q5M7Z0 435 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 NUP54Q7Z3B4 507 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 C16orf62Q7Z3J2 963 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 DPP10Q8N608 796 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 JSRP1Q96MG2 331 aaPredicted RBP16.8■□□□□ 0.28
SDF4-201ENST00000263741 DOHHQ9BU89 302 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 RTN4RQ9BZR6 473 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 MRGBPQ9NV56 204 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 ASF1BQ9NVP2 202 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 TUBA8Q9NY65 449 aaPredicted RBP16.8■□□□□ 0.28
SDF4-201ENST00000263741 PRAMEF25A6NGN4 478 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 SUV39H1O43463 412 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 WISP2O76076 250 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 UTS2O95399 124 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 ZIC2O95409 532 aaPredicted RBP16.79■□□□□ 0.28
SDF4-201ENST00000263741 KRT75O95678 551 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 NUDT7P0C024 238 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 COX4I1P13073 169 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 ADSLP30566 484 aaPredicted RBP16.79■□□□□ 0.28
SDF4-201ENST00000263741 PTGDSP41222 190 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 PNLIPRP2P54317 469 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 NRG4Q8WWG1 115 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 CMTM5Q96DZ9 223 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 CPPED1Q9BRF8 314 aaPredicted RBP16.79■□□□□ 0.28
SDF4-201ENST00000263741 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.79■□□□□ 0.28
SDF4-201ENST00000263741 FXYD1O00168 92 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 CDK2AP1O14519 115 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 SLC22A2O15244 555 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 ABCB7O75027 752 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 EVI2BP34910 448 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 STX5Q13190 355 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 AAGABQ6PD74 315 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 ANKFN1Q8N957 763 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 GATSQ8NAP1 163 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 OR52N2Q8NGI0 321 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 FAM110BQ8TC76 370 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 OSBPL11Q9BXB4 747 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 VCX3BQ9H321 246 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 CNIH4Q9P003 139 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 PCDHGB6Q9Y5F9 930 aa16.79■□□□□ 0.28
SDF4-201ENST00000263741 HEATR5AQ86XA9 2040 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 CENPVL1A0A0U1RR11 272 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 FAM166BA8MTA8 275 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 B8ZZF3 427 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 FCMRO60667 390 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 ANPEPP15144 967 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 CNR1P21554 472 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 EFR3AQ14156 821 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 SYPL1Q16563 259 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 OR4C3Q8NH37 302 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 MAL2Q969L2 176 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 TMCO6Q96DC7 493 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 SDF2Q99470 211 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 CGREF1Q99674 301 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 SLC7A8Q9UHI5 535 aa16.78■□□□□ 0.28
SDF4-201ENST00000263741 MRTO4Q9UKD2 239 aaKnown RBP16.78■□□□□ 0.28
SDF4-201ENST00000263741 LRRC3CA6NJW4 275 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 DUXAA6NLW8 204 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 KLRC4-KLRK1H3BQV0 150 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 AIM2O14862 343 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 HS6ST1O60243 411 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 DSTNP60981 165 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 PSPHP78330 225 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 RGNQ15493 299 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.77■□□□□ 0.28
SDF4-201ENST00000263741 GPAT3Q53EU6 434 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 OR5M10Q6IEU7 315 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 HEPHL1Q6MZM0 1159 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 FAM180AQ6UWF9 173 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 APOOLQ6UXV4 268 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 ROPN1LQ96C74 230 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 FAM173AQ9BQD7 235 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 MKLN1Q9UL63 735 aa16.77■□□□□ 0.28
SDF4-201ENST00000263741 MAGEA13PA6NCF6 341 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 BBIP1A8MTZ0 92 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 B4DXG7 233 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 ADAM10O14672 748 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 GNB5O14775 395 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 ASNA1O43681 348 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 MST1P26927 711 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 PRDX6P30041 224 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 MASP1P48740 699 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 PSMD4P55036 377 aaKnown RBP16.77■□□□□ 0.27
SDF4-201ENST00000263741 PLGLB1Q02325 96 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 FOXO1Q12778 655 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 GPR68Q15743 365 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 ATAD3BQ5T9A4 648 aa16.77■□□□□ 0.27
SDF4-201ENST00000263741 RPUSD3Q6P087 351 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms