RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HHIPL1Q96JK4 782 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 OR6C6A6NF89 314 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 TRIM64BA6NI03 449 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 C9J4A7 227 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 GPR32O75388 356 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 MPIG6BO95866 241 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 TMEM225BP0DP42 221 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
SMG6-201ENST00000263073 CLDN12P56749 244 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 AGAP6Q5VW22 663 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 LARP4Q71RC2 724 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMG6-201ENST00000263073 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 LILRB2Q8N423 598 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 ZNF689Q96CS4 500 aaPredicted RBP11.4□□□□□ -0.58
SMG6-201ENST00000263073 AGAP4Q96P64 663 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 NOX3Q9HBY0 568 aa11.4□□□□□ -0.58
SMG6-201ENST00000263073 VSX1Q9NZR4 365 aaPredicted RBP11.4□□□□□ -0.58
SMG6-201ENST00000263073 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 GABRR3A8MPY1 467 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 C2orf74A8MZ97 194 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 LRRTM2O43300 516 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 SOCS5O75159 536 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 IFNGR1P15260 489 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 PRSS3P35030 304 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 ARRB1P49407 418 aaPredicted RBP11.4□□□□□ -0.59
SMG6-201ENST00000263073 CXCR4P61073 352 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 RAET1LQ5VY80 246 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 ZNF679Q8IYX0 411 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 ARHGAP39Q9C0H5 1083 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 SAP130Q9H0E3 1048 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 KLHL21Q9UJP4 597 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 SLC7A11Q9UPY5 501 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 B3GNT3Q9Y2A9 372 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 NAALAD2Q9Y3Q0 740 aa11.4□□□□□ -0.59
SMG6-201ENST00000263073 FAM227AF5H4B4 570 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 SLC16A5O15375 505 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 F3P13726 295 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 CASRP41180 1078 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 SRYQ05066 204 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 CCNJQ5T5M9 372 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 FIP1L1Q6UN15 594 aaKnown RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 ZNF300Q96RE9 604 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 QRSL1Q9H0R6 528 aaKnown RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 METTL17Q9H7H0 456 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 PPP4R1LQ9P1A2 415 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 MYH11P35749 1972 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 A8MVJ9 347 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 GSRP00390 522 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 MAGEA6P43360 314 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 SF3B4Q15427 424 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMG6-201ENST00000263073 FAM189A2Q15884 450 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 AKR1C8PQ5T2L2 129 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 CSNK1A1LQ8N752 337 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 SPHK2Q9NRA0 654 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 ACSL5Q9ULC5 683 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 A6NLC8 198 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 JRKO75564 520 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 COQ5Q5HYK3 327 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 STEAP3Q658P3 488 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 APOOLQ6UXV4 268 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 FAM109AQ8N4B1 249 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 CENPOQ9BU64 300 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 PTGES2Q9H7Z7 377 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 GALNT9Q9HCQ5 603 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 H3BML4 177 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 SYT7O43581 403 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 KLF8O95600 359 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 IFNA17P01571 189 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 GABRR1P24046 479 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 PCSK6P29122 969 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 ZNF280AP59817 542 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 SLC18B1Q6NT16 456 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 RPL13AP3Q6NVV1 102 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 GPR155Q7Z3F1 870 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 VRK2Q86Y07 508 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
SMG6-201ENST00000263073 HS6ST2Q96MM7 605 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 ZDHHC7Q9NXF8 308 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 FBXL2Q9UKC9 423 aa11.39□□□□□ -0.59
SMG6-201ENST00000263073 LDB3O75112 727 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 FBXO24O75426 580 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 CPNE6O95741 557 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 ACY1Q03154 408 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 GRM7Q14831 915 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 USP53Q70EK8 1073 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 NUDT8Q8WV74 236 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 TMEM40Q8WWA1 233 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 NEIL2Q969S2 332 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 RCE1Q9Y256 329 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 GPR45Q9Y5Y3 372 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 NPIPB15A6NHN6 443 aaPredicted RBP11.38□□□□□ -0.59
SMG6-201ENST00000263073 CLEC3AO75596 197 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
SMG6-201ENST00000263073 CDS1Q92903 461 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms