RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 BACE2Q9Y5Z0 518 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 I6L893 689 aaPredicted RBP12.8□□□□□ -0.36
TCF3-201ENST00000262965 ADRB3P13945 408 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 RPL13AP3Q6NVV1 102 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 TMEM156Q8N614 296 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 LILRB4Q8NHJ6 448 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 NIPSNAP1Q9BPW8 284 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 RNF167Q9H6Y7 350 aa12.8□□□□□ -0.36
TCF3-201ENST00000262965 A0A0G2JMP0 313 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 GFRA2O00451 464 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 TBC1D25Q3MII6 688 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ATAD3CQ5T2N8 411 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 SLC22A10Q63ZE4 541 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 FAM198BQ6UWH4 519 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 CADM3Q8N126 398 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 OR4M2Q8NGB6 313 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 NT5C3BQ969T7 300 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 TREX2Q9BQ50 279 aaPredicted RBP12.79□□□□□ -0.36
TCF3-201ENST00000262965 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 RNF186Q9NXI6 227 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 CACNG2Q9Y698 323 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 HSPA12AO43301 675 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 AP1G1O43747 822 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 MT-ND4P03905 459 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ACTA2P62736 377 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ACTG2P63267 376 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 TMEM35AQ53FP2 167 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 MAFIPQ8WZ33 124 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ACTRT3Q9BYD9 372 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 BRF2Q9HAW0 419 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ZNF195O14628 629 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 KIAA0355O15063 1070 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ANKRD28O15084 1053 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 UGDHO60701 494 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 PPM1BO75688 479 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 SLC22A5O76082 557 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ZNF16P17020 682 aaPredicted RBP12.79□□□□□ -0.36
TCF3-201ENST00000262965 TGFBR1P36897 503 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 ZNF616Q08AN1 781 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 SF3B4Q15427 424 aaKnown RBP eCLIP12.79□□□□□ -0.369e-7■■■□□ 17.9
TCF3-201ENST00000262965 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 HS6ST2Q96MM7 605 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 SLC22A12Q96S37 553 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 AMBRA1Q9C0C7 1298 aa12.79□□□□□ -0.36
TCF3-201ENST00000262965 TVP23AA6NH52 213 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 SEC14L2O76054 403 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 GPR143P51810 404 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 SF3A2Q15428 464 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 SGCAQ16586 387 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 VRK2Q86Y07 508 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 ENTHD1Q8IYW4 607 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 LILRA3Q8N6C8 439 aaPredicted RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 ACOT4Q8N9L9 421 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 SLA2Q9H6Q3 261 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 KCNN3Q9UGI6 736 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 TMEM14AQ9Y6G1 99 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 MRPS14O60783 128 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 GABARAPO95166 117 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 KCNK5O95279 499 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 KLKB1P03952 638 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 RPS21P63220 83 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 CDKL4Q5MAI5 379 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 C2orf74A8MZ97 194 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 RFPL3O75679 317 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 ARHGEF15O94989 841 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 NR0B1P51843 470 aaKnown RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 TMEM239Q8WW34 195 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 SLCO4A1Q96BD0 722 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 GOSR2O14653 212 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 AGPAT2O15120 278 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 PIP5K1CO60331 668 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 LDB3O75112 727 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 CCL5P13501 91 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 ZNF14P17017 642 aaPredicted RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 PVALBP20472 110 aaPredicted RBP12.78□□□□□ -0.36
TCF3-201ENST00000262965 PRKACBP22694 351 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 HTR2AP28223 471 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 COX20Q5RI15 118 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 AGAP7PQ5VUJ5 663 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
TCF3-201ENST00000262965 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms