RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 E9PQ18 207 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 GABRPO00591 440 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 ACP2P11117 423 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 TBXA2RP21731 343 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 MAP2K3P46734 347 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 RAB28P51157 221 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 P2RX3P56373 397 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF542PQ5EBM4 170 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 SUN3Q8TAQ9 357 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 LCN9Q8WX39 176 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 HHIPL1Q96JK4 782 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 SPATA5L1Q9BVQ7 753 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
SEC23B-201ENST00000262544 TMEM74BQ9NUR3 256 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF222Q9UK12 451 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 WDR45Q9Y484 360 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
SEC23B-201ENST00000262544 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF888P0CJ79 500 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 PVRP15151 417 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SHC1P29353 583 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ETV6P41212 452 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 PLK5Q496M5 336 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TRMT12Q53H54 448 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 FAM26EQ8N5C1 309 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SLC7A6Q92536 515 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 FGF13Q92913 245 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 RIPOR3Q96MK2 946 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 IFT27Q9BW83 186 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 CDCP1Q9H5V8 836 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 C20orf141Q9NUB4 165 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 NPAP1Q9NZP6 1156 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 PCDHGB2Q9Y5G2 931 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TDRD6O60522 2096 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 C17orf113A0A1B0GUU1 675 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 PEX12O00623 359 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 EEF1E1O43324 174 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 EML2O95834 649 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 PIPP12273 146 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ATP5A1P25705 553 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 GRPRP30550 384 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 HTR2BP41595 481 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 REEP5Q00765 189 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ST3GAL3Q11203 375 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TRAM2Q15035 370 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZSWIM7Q19AV6 140 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 BTBD16Q32M84 506 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 NOXA1Q86UR1 476 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SFTPA2Q8IWL1 248 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 VWA5B2Q8N398 1253 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 BADQ92934 168 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TSACCQ96A04 125 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 KXD1Q9BQD3 176 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF559Q9BR84 538 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SLC6A20Q9NP91 592 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZSCAN5BA6NJL1 495 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TOXO94900 526 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 TIMP1P01033 207 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 CPEP16870 476 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ALAS2P22557 587 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 EXOSC7Q15024 291 aaKnown RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 BCL2L15Q5TBC7 163 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 OR7G2Q8NG99 324 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 AP3S1Q92572 193 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-201ENST00000262544 SLC41A3Q96GZ6 507 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 COQ3Q9NZJ6 369 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 FRYLO94915 3013 aa12.1□□□□□ -0.47
SEC23B-201ENST00000262544 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
SEC23B-201ENST00000262544 A0A1W2PQU0 124 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 DAPL1A0PJW8 107 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 TSPAN11A1L157 253 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 FAM171A2A8MVW0 826 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 LYRM1O43325 122 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 NT5EP21589 574 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 PCDH1Q08174 1060 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 ELOAQ14241 798 aaKnown RBP12.09□□□□□ -0.47
SEC23B-201ENST00000262544 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 C1orf94Q6P1W5 598 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 ABHD17CQ6PCB6 329 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 XKRXQ6PP77 449 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 SLC38A6Q8IZM9 456 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 KLHL36Q8N4N3 616 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 TMEM99Q8N816 258 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 PATE1Q8WXA2 126 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 SLC35A4Q96G79 324 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
SEC23B-201ENST00000262544 SIRT4Q9Y6E7 314 aaPredicted RBP12.09□□□□□ -0.47
SEC23B-201ENST00000262544 CELSR3Q9NYQ7 3312 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms