RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CPN2P22792 545 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 KDELR2P33947 212 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 BUD31P41223 144 aaPredicted RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 CRATP43155 626 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 AVPR1BP47901 424 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 CDK9P50750 372 aaKnown RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 CHRNB3Q05901 458 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 HSPB3Q12988 150 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 ATP6AP1Q15904 470 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 LRRC36Q1X8D7 754 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 GRAMD1BQ3KR37 738 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 GCNT6Q5T4J0 391 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 TMEM64Q6YI46 380 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 AMIGO2Q86SJ2 522 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 GHDCQ8N2G8 530 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 PACRGLQ8N7B6 248 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 AMER2Q8N7J2 671 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 C11orf65Q8NCR3 313 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 LILRB4Q8NHJ6 448 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 FBXO30Q8TB52 745 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 PPWD1Q96BP3 646 aaKnown RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 CNRIP1Q96F85 164 aaPredicted RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 ZNF681Q96N22 645 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 BBS4Q96RK4 519 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 SEPHS2Q99611 448 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 CHID1Q9BWS9 393 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 NPLQ9BXD5 320 aaPredicted RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 SLC24A3Q9HC58 644 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 GIMAP4Q9NUV9 329 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 SCOCQ9UIL1 159 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 PSME2Q9UL46 239 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 FAF1Q9UNN5 650 aaPredicted RBP12.27□□□□□ -0.45
SGCA-201ENST00000262018 SNX8Q9Y5X2 465 aa12.27□□□□□ -0.45
SGCA-201ENST00000262018 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 IGHV1-45A0A0A0MS14 117 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 A0A0A6YYC8 382 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 GLOD5A6NK44 160 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 WASHC1A8K0Z3 465 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 H0YIG0 161 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 I3L1I5 382 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 FOXS1O43638 330 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 ERAL1O75616 437 aaKnown RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 CTAG2O75638 210 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 PRKD3O94806 890 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 NSA2O95478 260 aaKnown RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 RPSAP08865 295 aaKnown RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 PCSK6P29122 969 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 CHRNB4P30926 498 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 MAGEA8P43361 318 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 NCBP2P52298 156 aaKnown RBP eCLIP12.26□□□□□ -0.45
SGCA-201ENST00000262018 MED21Q13503 144 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 OR52E8Q6IFG1 317 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 LAPTM4BQ86VI4 370 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 RNF130Q86XS8 419 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 CHERPQ8IWX8 916 aaKnown RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 SAMD14Q8IZD0 417 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 FAM86B1Q8N7N1 296 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 SFXN5Q8TD22 340 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 MMABQ96EY8 250 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 SLC47A1Q96FL8 570 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 RMND5BQ96G75 393 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 CENPNQ96H22 339 aaPredicted RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 PYURFQ96I23 114 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 HES7Q9BYE0 225 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 SEMA6AQ9H2E6 1030 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 LRFN1Q9P244 771 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 TEKT2Q9UIF3 430 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 RPS6KA6Q9UK32 745 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 EDARQ9UNE0 448 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 SAMD4AQ9UPU9 718 aaKnown RBP12.26□□□□□ -0.45
SGCA-201ENST00000262018 RNF6Q9Y252 685 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 V9GYQ6 96 aa12.26□□□□□ -0.45
SGCA-201ENST00000262018 TPST1O60507 370 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 B4GALT2O60909 372 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 DNAJB6O75190 326 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 ARAFP10398 606 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 UQCRBP14927 111 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 FBLP22087 321 aaKnown RBP12.25□□□□□ -0.45
SGCA-201ENST00000262018 CCT3P49368 545 aaKnown RBP12.25□□□□□ -0.45
SGCA-201ENST00000262018 EMP2P54851 167 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 AQP4P55087 323 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 DSTNP60981 165 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 DUSP2Q05923 314 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 CBLL1Q75N03 491 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 CCDC80Q76M96 950 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 EIF3MQ7L2H7 374 aaKnown RBP12.25□□□□□ -0.45
SGCA-201ENST00000262018 PRSS41Q7RTY9 318 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 C6orf120Q7Z4R8 191 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 SIAH3Q8IW03 269 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 SLC30A8Q8IWU4 369 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 CA13Q8N1Q1 262 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 MARVELD2Q8N4S9 558 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 OR9A4Q8NGU2 314 aa12.25□□□□□ -0.45
SGCA-201ENST00000262018 EME1Q96AY2 570 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms