RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PROKR1Q8TCW9 393 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 WDR83Q9BRX9 315 aaKnown RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 P2RY12Q9H244 342 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 PCDHGB6Q9Y5F9 930 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 GPR45Q9Y5Y3 372 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 SCN4AP35499 1836 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 SPTY2D1-AS1A0A0U1RR47 76 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 NPPBP16860 134 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 KCNJ10P78508 379 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 LEG1Q6P5S2 330 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 ABHD17CQ6PCB6 329 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 LINC00696Q6ZRV3 163 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 VTCN1Q7Z7D3 282 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 CNEP1R1Q8N9A8 125 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 ZNF548Q8NEK5 533 aaPredicted RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 OR5D16Q8NGK9 328 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TMEM239Q8WW34 195 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 LCORQ96JN0 433 aaPredicted RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 PARPBPQ9NWS1 579 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 SH3BGRL2Q9UJC5 107 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 LSM1O15116 133 aaKnown RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 INMTO95050 263 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 GPR3P46089 330 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 CBX3Q13185 183 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 OCLNQ16625 522 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TSTQ16762 297 aaKnown RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 HLA-BQ31612 363 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 XKR5Q6UX68 686 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 LILRA3Q8N6C8 439 aaPredicted RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 SPTSSAQ969W0 71 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TSC22D4Q9Y3Q8 395 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 M0R296 226 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 PPP6CO00743 305 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 MTRF1O75570 445 aaKnown RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 BMP4P12644 408 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 BCL6P41182 706 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 CBLBQ13191 982 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 MAD2L1BPQ15013 274 aaPredicted RBP13.07□□□□□ -0.32
CDH1-201ENST00000261769 RUNDC3AQ59EK9 446 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 SLC22A10Q63ZE4 541 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 OR4K3Q96R72 315 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 FEVQ99581 238 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 CLMPQ9H6B4 373 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 ING3Q9NXR8 418 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 EMCNQ9ULC0 261 aa13.07□□□□□ -0.32
CDH1-201ENST00000261769 GPX3P22352 226 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 NPRL3Q12980 569 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 RPS26P11Q5JNZ5 115 aaPredicted RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 LMNTD1Q8N9Z9 388 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 FAM46AQ96IP4 442 aaKnown RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 SORT1Q99523 831 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 OR10A5Q9H207 317 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 LYRM4Q9HD34 91 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 ATXN7L1Q9ULK2 861 aaPredicted RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 DHDHQ9UQ10 334 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 LOXL2Q9Y4K0 774 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 M0R3H8 397 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 ZNF264O43296 627 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 THBS2P35442 1172 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 CAPZBP47756 277 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 CSNK1A1P48729 337 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 CYB561P49447 251 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 OR7A5Q15622 319 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 PAGE3Q5JUK9 113 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 RPS19BP1Q86WX3 136 aaKnown RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 ZNF740Q8NDX6 193 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
CDH1-201ENST00000261769 EGLN2Q96KS0 407 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 SLC30A3Q99726 388 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 SLC7A7Q9UM01 511 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 hCG_1807616A0A1W2PRN6 198 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 GCH1P30793 250 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 APLNRP35414 380 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 LIMS2Q7Z4I7 341 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 NAXEQ8NCW5 288 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 NME4O00746 187 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 CD1CP29017 333 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 ACVR1BP36896 505 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 TFF2Q03403 129 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 C17orf67Q0P5P2 114 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 TUBA3CQ13748 450 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 MEP1AQ16819 746 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 FBXL6Q8N531 539 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 MUCL1Q96DR8 90 aa13.06□□□□□ -0.32
CDH1-201ENST00000261769 TUBA8Q9NY65 449 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms