RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 GNPDA2Q8TDQ7 276 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ADAMTS15Q8TE58 950 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SUSD6Q92537 303 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 FAM83CQ9BQN1 747 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ACAD8Q9UKU7 415 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ZDBF2Q9HCK1 2354 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 LRIT2A6NDA9 550 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 FGF19O95750 216 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 RPN2P04844 631 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ST3GAL3Q11203 375 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 MINDY4Q4G0A6 757 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF614Q8N883 585 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 SAMD12Q8N8I0 201 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 OR7D2Q96RA2 312 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 RHBGQ9H310 441 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ACSS1Q9NUB1 689 aaPredicted RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 GPR34Q9UPC5 381 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 TMEM129A0AVI4 362 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 TSPAN11A1L157 253 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 CHRNB1P11230 501 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ELK1P19419 428 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 SHC1P29353 583 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 GCGRP47871 477 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 EVX1P49640 407 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 MZT2AQ6P582 158 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 RFKQ969G6 155 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 RNF170Q96K19 258 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 DHRS1Q96LJ7 313 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 INSM2Q96T92 566 aaPredicted RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 ATF6BQ99941 703 aa13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 SNRNP200O75643 2136 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC9A3R1O14745 358 aaPredicted RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ORC5O43913 435 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 VEGFDO43915 354 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ALX3O95076 343 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 NFATC1O95644 943 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 GKN3PP0CG01 181 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 EVI2BP34910 448 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ACVR1BP36896 505 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 DSG2Q14126 1118 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF234Q14588 700 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 BCL2L15Q5TBC7 163 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC16A11Q8NCK7 471 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 OR8H1Q8NGG4 311 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 TRIM63Q969Q1 353 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 DPH1Q9BZG8 443 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 MRPS30Q9NP92 439 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 HINT3Q9NQE9 182 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 C4orf51C9J302 202 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 NPIPA7E9PJI5 369 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 MAN2B1O00754 1011 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 KAT7O95251 611 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 AIFM1O95831 613 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 NPIPA8P0DM63 369 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 FOSL2P15408 326 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ARSBP15848 533 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 TALDO1P37837 337 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 BCL6P41182 706 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 GAS1P54826 345 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 PRR5P85299 388 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 TSPAN31Q12999 210 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 HNRNPA1L2Q32P51 320 aaKnown RBP13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 YIF1BQ5BJH7 314 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 BHLHB9Q6PI77 547 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 RD3Q7Z3Z2 195 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 CYB561A3Q8NBI2 242 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 OR7G1Q8NGA0 311 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 GRPEL2Q8TAA5 225 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 FUZQ9BT04 418 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 AICDAQ9GZX7 198 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 ABCG5Q9H222 651 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 DZANK1Q9NVP4 752 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 TAS2R7Q9NYW3 318 aa13.52□□□□□ -0.24
SFSWAP-201ENST00000261674 LANCL1O43813 399 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 ERP29P30040 261 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 MAT2AP31153 395 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 P2RY2P41231 377 aa13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
SFSWAP-201ENST00000261674 SRP9P49458 86 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms