RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LUZP1Q86V48 1076 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CCDC71Q8IV32 467 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 RNF148Q8N7C7 305 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF321PQ8N8H1 164 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 OR2T3Q8NH03 318 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 LZICQ8WZA0 190 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 SLC41A3Q96GZ6 507 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 ZBED3Q96IU2 234 aaPredicted RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 TSG101Q99816 390 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 HSD17B14Q9BPX1 270 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 SIKE1Q9BRV8 207 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 FICDQ9BVA6 458 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 API5Q9BZZ5 524 aaKnown RBP3.53□□□□□ -1.84
CCDC54-201ENST00000261058 VCX2Q9H322 139 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 SDHAF3Q9NRP4 125 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 ZNF446Q9NWS9 450 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 VPS54Q9P1Q0 977 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 CSAG2Q9Y5P2 127 aa3.53□□□□□ -1.84
CCDC54-201ENST00000261058 UQCRHLA0A096LP55 91 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 A0A1B0GUA9 196 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 HSBP1L1C9JCN9 74 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 NEDD8-MDP1E9PL57 170 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 LSM1O15116 133 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZW10O43264 779 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 LRRTM2O43300 516 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 NIPSNAP2O75323 286 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 UQCRHP07919 91 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 RALBP11234 206 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 GATA1P15976 413 aaPredicted RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 GCFC2P16383 781 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 EVI2BP34910 448 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 TRIM23P36406 574 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ID1P41134 155 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SLC1A4P43007 532 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PGFP49763 221 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SLC8A3P57103 927 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SRP54P61011 504 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 MS4A2Q01362 244 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 GALK2Q01415 458 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 FCHO2Q0JRZ9 810 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PPP1R8Q12972 351 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 CYLC2Q14093 348 aaPredicted RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 GNA13Q14344 377 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PDK3Q15120 406 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 STK38Q15208 465 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PCK2Q16822 640 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF528Q3MIS6 628 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 Q3ZCU0 254 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 GPAT3Q53EU6 434 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF772Q68DY9 489 aaPredicted RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PDPK2PQ6A1A2 396 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 TWF2Q6IBS0 349 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZNF841Q6ZN19 808 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 COMTD1Q86VU5 262 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 CATSPER3Q86XQ3 398 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZDHHC21Q8IVQ6 265 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 CD302Q8IX05 232 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 FGFRL1Q8N441 504 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 COLGALT1Q8NBJ5 622 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SLC22A8Q8TCC7 542 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 DQX1Q8TE96 717 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 DNAJA4Q8WW22 397 aaPredicted RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 RASL10AQ92737 203 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SOSTQ9BQB4 213 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ST6GALNAC5Q9BVH7 336 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 TDRD3Q9H7E2 651 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 COG4Q9H9E3 785 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 Q9HAA7 133 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SLC25A19Q9HC21 320 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 SLC39A1Q9NY26 324 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 TUBGCP4Q9UGJ1 667 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 PAIP2BQ9ULR5 123 aaKnown RBP3.53□□□□□ -1.85
CCDC54-201ENST00000261058 NUDCQ9Y266 331 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 STK38LQ9Y2H1 464 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 AUP1Q9Y679 476 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 AP4B1Q9Y6B7 739 aa3.53□□□□□ -1.85
CCDC54-201ENST00000261058 ZMYM6O95789 1325 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 A0A0A6YYD4 124 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 RPL37AP8A6NKH3 93 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 SRRM5B3KS81 715 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 SHISA9B4DS77 424 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 K7EQM0 130 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 B4GALT2O60909 372 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 TOM1L1O75674 476 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 OR5F1O95221 314 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 RENP00797 406 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CHRNA1P02708 482 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 HIST1H2AGP0C0S8 130 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 IQCF3P0C7M6 154 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CPN2P22792 545 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 CYP2F1P24903 491 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ANXA13P27216 316 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 MARCKSP29966 332 aaPredicted RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 ARHGDIBP52566 201 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 SUCLG1P53597 346 aaKnown RBP3.52□□□□□ -1.85
CCDC54-201ENST00000261058 MTTPP55157 894 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 PRMT2P55345 433 aa3.52□□□□□ -1.85
CCDC54-201ENST00000261058 RPL23AP62750 156 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms