RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 MSH4O15457 936 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 CYB5BO43169 146 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF264O43296 627 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 AIREO43918 545 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 PIGRP01833 764 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 ARR3P36575 388 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 SPP2Q13103 211 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 CEBPEQ15744 281 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 HAGHQ16775 308 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 AADACL2Q6P093 401 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 ALKAL2Q6UX46 152 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 SAT2Q96F10 170 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 CENPNQ96H22 339 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 ZC3HAV1LQ96H79 300 aaKnown RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 FAM84AQ96KN4 292 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 SAMD8Q96LT4 415 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 PHB2Q99623 299 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 CITED2Q99967 270 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 NIPSNAP1Q9BPW8 284 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 C11orf70Q9BRQ4 267 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 THAP7Q9BT49 309 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 MYL10Q9BUA6 226 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 NLE1Q9NVX2 485 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-201ENST00000258733 OR14J1Q9UGF5 321 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 OR52A1Q9UKL2 312 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 RHBDD3Q9Y3P4 386 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 POMT1Q9Y6A1 747 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 FER1L6Q2WGJ9 1857 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 NFASCO94856 1347 aa7.28□□□□□ -1.24
GPNMB-201ENST00000258733 PHIPQ8WWQ0 1821 aa7.27□□□□□ -1.24
GPNMB-201ENST00000258733 PALLDQ8WX93 1383 aa7.27□□□□□ -1.24
GPNMB-201ENST00000258733 A0A087WV62 115 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CCDC195A0A1B0GUA6 201 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 K7ERI5 159 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 NFKBIEO00221 500 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 AGRPO00253 132 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FOXO3O43524 673 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 NCR1O76036 304 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 JCHAINP01591 159 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 RPN2P04844 631 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 H2AFZP0C0S5 128 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CTSAP10619 480 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF35P13682 527 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 MAP2K3P46734 347 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 TAS2R39P59534 338 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 MXD1Q05195 221 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF79Q15937 498 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CRY2Q49AN0 593 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 KIAA1211LQ6NV74 962 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 H2AFVQ71UI9 128 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM135Q86UB9 458 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 C15orf54Q8N8G6 183 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 DUSP18Q8NEJ0 188 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 OR5R1Q8NH85 324 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 MZB1Q8WU39 189 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 MARVELD1Q9BSK0 173 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 LGR4Q9BXB1 951 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 C20orf27Q9GZN8 174 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 PCDHAC1Q9H158 963 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 AGPAT4Q9NRZ5 378 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 KLHL28Q9NXS3 571 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FOXJ2Q9P0K8 574 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 NAGPAQ9UK23 515 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 A0A1W2PQL4 384 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-201ENST00000258733 SEMA7AO75326 666 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 HPP00738 406 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 GPIP06744 558 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 LPOP22079 712 aaPredicted RBP7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FASP25445 335 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CORO1AP31146 461 aaKnown RBP7.27□□□□□ -1.25
GPNMB-201ENST00000258733 MNDAP41218 407 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 KHKP50053 298 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CRYBA4P53673 196 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 DLX5P56178 289 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 PPP3R1P63098 170 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 DHODHQ02127 395 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 C2orf27AQ580R0 203 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FBXO47Q5MNV8 452 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 C1orf186Q6ZWK4 172 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 RD3Q7Z3Z2 195 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF573Q86YE8 665 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 C10orf107Q8IVU9 208 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 SLC44A3Q8N4M1 653 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FAM71CQ8NEG0 241 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 BEST4Q8NFU0 473 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CANT1Q8WVQ1 401 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM234Q8WY98 164 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 ARSGQ96EG1 525 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FAM120BQ96EK7 910 aaKnown RBP7.27□□□□□ -1.25
GPNMB-201ENST00000258733 FN3KQ9H479 309 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 SAYSD1Q9NPB0 183 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM248Q9NWD8 314 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 SLC35A3Q9Y2D2 325 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 PCDHB14Q9Y5E9 798 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 V9GYH0 126 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 RGPD5Q99666 1765 aa7.27□□□□□ -1.25
GPNMB-201ENST00000258733 CPED1A4D0V7 1026 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 FABP12A6NFH5 140 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms