RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 OR4C3Q8NH37 302 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF563Q8TA94 476 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF775Q96BV0 537 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 FLRT3Q9NZU0 649 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PRAMEF26H0Y7S4 382 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 GTPBP1O00178 669 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 CDRT1O95170 752 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PPP1R3DO95685 299 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 MYL12AP19105 171 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PAICSP22234 425 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 TNFRSF4P43489 277 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 KCNJ5P48544 419 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 FBXW4P57775 412 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF91Q05481 1191 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 TDGQ13569 410 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF658BQ4V348 819 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZMAT1Q5H9K5 638 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 METTL2BQ6P1Q9 378 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 FAM199XQ6PEV8 388 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 KLBQ86Z14 1044 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 OR52E4Q8NGH9 312 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 SMPDL3BQ92485 455 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZMYND19Q96E35 227 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 SECISBP2Q96T21 854 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 MAGIXQ9H6Y5 334 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 WASH6PQ9NQA3 447 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 RPS6KB2Q9UBS0 482 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 NDRG4Q9ULP0 352 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 AP1M2Q9Y6Q5 423 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PCNX3Q9H6A9 2034 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 DMXL2Q8TDJ6 3036 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 CLCA1A8K7I4 914 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 AP1G1O43747 822 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 SSX4O60224 188 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 HLA-DQA2P01906 255 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ACP2P11117 423 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 BMP7P18075 431 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 GSTM2P28161 218 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 S100A5P33763 92 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 EMDP50402 254 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 CDH11P55287 796 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 TUBA4AP68366 448 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 CCINQ13939 588 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ARHGAP19Q14CB8 494 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 LARS2Q15031 903 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 TOMM20Q15388 145 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 NSDHLQ15738 373 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 INAVAQ3KP66 663 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 DCST2Q5T1A1 773 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ABI3BPQ7Z7G0 1075 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 PAQR7Q86WK9 346 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 GPR135Q8IZ08 494 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 CYP4Z2PQ8N1L4 340 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 DNAJC22Q8N4W6 341 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 OR8D4Q8NGM9 314 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 OR5M1Q8NGP8 315 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 OR13C5Q8NGS8 318 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 RAB2BQ8WUD1 216 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF347Q96SE7 839 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 MAP1AP78559 2803 aaPredicted RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ATRXP46100 2492 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 SPTY2D1-AS1A0A0U1RR47 76 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 J3QLW9 94 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 KDM1AO60341 852 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 PDE9AO76083 593 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 EPPINO95925 133 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF19P17023 458 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 HOXB9P17482 250 aaPredicted RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 CSTF2P33240 577 aaKnown RBP eCLIP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 RPS15AP62244 130 aaKnown RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 PDE7AQ13946 482 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 MFSD12Q6NUT3 480 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 BHLHB9Q6PI77 547 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 LANCL3Q6ZV70 420 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 APLFQ8IW19 511 aaPredicted RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 SRFBP1Q8NEF9 429 aaKnown RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 SLC39A7Q92504 469 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 MYDGFQ969H8 173 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 SLC41A3Q96GZ6 507 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 MSLNLQ96KJ4 702 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 HCAR1Q9BXC0 346 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 BEX1Q9HBH7 125 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 SRA1Q9HD15 236 aaKnown RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 PRTFDC1Q9NRG1 225 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 MYEF2Q9P2K5 600 aaKnown RBP8.46□□□□□ -1.05
CKAP2-201ENST00000258607 A4GNTQ9UNA3 340 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 VDAC3Q9Y277 283 aa8.46□□□□□ -1.05
CKAP2-201ENST00000258607 COL4A4P53420 1690 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-201ENST00000258607 A0A1W2PRG6 482 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 MBTPS2O43462 519 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 PSMB10P40306 273 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 MAGEA2P43356 314 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 GIPRP48546 466 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 CSNK2BP67870 215 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 PROX2Q3B8N5 592 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms