RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 H2AFXP16104 143 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 NT5EP21589 574 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 PSMA5P28066 241 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ACVR1BP36896 505 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 MAGEA5P43359 124 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 IFNAR2P48551 515 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 HNMTP50135 292 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 RPL8P62917 257 aaKnown RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 NUCB2P80303 420 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 PJVKQ0ZLH3 352 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 PEX6Q13608 980 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 RUNX3Q13761 415 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 SLC10A1Q14973 349 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ATXN7L3Q14CW9 347 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 PDK4Q16654 411 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 RABGAP1LQ5R372 815 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 FAM120AOSQ5T036 256 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZNF57Q68EA5 555 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 PVRIGQ6DKI7 326 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZNF600Q6ZNG1 722 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 GCNT7Q6ZNI0 430 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ERICH1Q86X53 443 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 NAXDQ8IW45 347 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 TBC1D21Q8IYX1 336 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 BPIFB2Q8N4F0 458 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 RAET1EQ8TD07 263 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ADAMTS16Q8TE57 1224 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 FAM222BQ8WU58 562 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 ALG12Q9BV10 488 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 NFKBIZQ9BYH8 718 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 EXOSC3Q9NQT5 275 aaKnown RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 IMPAD1Q9NX62 359 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 MRPL39Q9NYK5 338 aaKnown RBP3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 EHFQ9NZC4 300 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 GSTK1Q9Y2Q3 226 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 USP16Q9Y5T5 823 aa3.33□□□□□ -1.88
HMGB1P5-201ENST00000255320 CCT8L1PA6NM43 557 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 A8MUI8 341 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 H0YCG3 227 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR1F1O43749 312 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 SPAG6O75602 509 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 SLC2A10O95528 541 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 PRG2P13727 222 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 ACADSP16219 412 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 TPSB2P20231 275 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 ATP6V1C1P21283 382 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 TBXA2RP21731 343 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 PSMA2P25787 234 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 OTX2P32243 289 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 BDKRB1P46663 353 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 RGS4P49798 205 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 IST1P53990 364 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 ERVPABLB-1P60509 514 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 EWSR1Q01844 656 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 TPSAB1Q15661 275 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 EIPR1Q53HC9 387 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 VASH2Q86V25 355 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 IFNEQ86WN2 208 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 TMEM17Q86X19 198 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 FAM133AQ8N9E0 248 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR52M1Q8NGK5 317 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 VN1R17PQ8TDU5 208 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 SPRYD4Q8WW59 207 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 FAM3CQ92520 227 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZSCAN5AQ9BUG6 496 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 POLR1EQ9GZS1 481 aaKnown RBP3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 OPN3Q9H1Y3 402 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 GMPPBQ9Y5P6 360 aa3.32□□□□□ -1.88
HMGB1P5-201ENST00000255320 ATP10DQ9P241 1426 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 A0A087WWV3 80 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 GSAPA4D1B5 854 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 FAM220BPB1ANY3 271 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 G3V3Y1 287 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 K7EQM0 130 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 LATO43561 262 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SRPX2O60687 465 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 TSC22D2O75157 780 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 BCAS1O75363 584 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 TRIM3O75382 744 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 RHBDL1O75783 438 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 GJB5O95377 273 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 TBX6O95947 436 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PDHBP11177 359 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 RPA2P15927 270 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 UQCRC2P22695 453 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PTBP1P26599 531 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 NOVA1P51513 510 aaKnown RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 LIM2P55344 173 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 RND3P61587 244 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PAX2Q02962 417 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PUDPQ08623 228 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SELPLGQ14242 412 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 CYP51A1Q16850 503 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SLC22A6Q4U2R8 563 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 ACSM5Q6NUN0 579 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms