RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 RASSF1Q9NS23 344 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 DDX18Q9NVP1 670 aaKnown RBP11.2□□□□□ -0.62
NIP7-201ENST00000254940 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 LYVE1Q9Y5Y7 322 aa11.2□□□□□ -0.62
NIP7-201ENST00000254940 C5orf58C9J3I9 102 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 M0R3H8 397 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 XPNPEP2O43895 674 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 FCMRO60667 390 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 FESP07332 822 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 CHRM4P08173 479 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 DNAJA1P31689 397 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 RPL5P46777 297 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 CLK3P49761 638 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 HOXC5Q00444 222 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 CD47Q08722 323 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 Q0VFX4 171 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 PCOLCEQ15113 449 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 EXOC3L2Q2M3D2 409 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ZNF628Q5EBL2 1059 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 CRB2Q5IJ48 1285 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 MEX3DQ86XN8 651 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 CCDC71Q8IV32 467 aaPredicted RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 VWA5B2Q8N398 1253 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SVOPLQ8N434 492 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SLC5A8Q8N695 610 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SIRT6Q8N6T7 355 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SLC16A11Q8NCK7 471 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ELP4Q96EB1 424 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ING2Q9H160 280 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ACSS1Q9NUB1 689 aaPredicted RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 MMACHCQ9Y4U1 282 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 NPIPA5A0A0B4J1W7 369 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 PTGES3LE9PB15 166 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 NPIPA7E9PJI5 369 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 TAF4O00268 1085 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 TNFRSF11BO00300 401 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 MFN2O95140 757 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 DDAH2O95865 285 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 EPPINO95925 133 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 CBX7O95931 251 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ONECUT2O95948 504 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 NPIPA8P0DM63 369 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 COX6A1P12074 109 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 MMP11P24347 488 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 EEF1B2P24534 225 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 DEFB109BQ30KR1 87 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 CNPY1Q3B7I2 92 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 KDM4DQ6B0I6 523 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 KLHL17Q6TDP4 642 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SPACA3Q8IXA5 215 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 OR4N2Q8NGD1 307 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ADAMTS18Q8TE60 1221 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SLC9A6Q92581 669 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 SLC35G5Q96KT7 338 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 ZNF300Q96RE9 604 aaPredicted RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 MRPS26Q9BYN8 205 aaKnown RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 ANKRD10Q9NXR5 420 aa11.19□□□□□ -0.62
NIP7-201ENST00000254940 HEMK1Q9Y5R4 338 aaPredicted RBP11.19□□□□□ -0.62
NIP7-201ENST00000254940 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 TRBV11-1A0A0K0K1C0 115 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 TBX19O60806 448 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 NR2F1P10589 423 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 TPD52P55327 224 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 ZNF155Q12901 538 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 PIN1Q13526 163 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 B3GNTL1Q67FW5 361 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 DEF8Q6ZN54 512 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 HIPK1Q86Z02 1210 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 PLPP5Q8NEB5 264 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 PIK3C3Q8NEB9 887 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 NUP43Q8NFH3 380 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 OR5M3Q8NGP4 307 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 PSMA8Q8TAA3 256 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 PIK3R3Q92569 461 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 GIMAP5Q96F15 307 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 KIF17Q9P2E2 1029 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 ZNF223Q9UK11 482 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 ANGPT4Q9Y264 503 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 NTNG1Q9Y2I2 539 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 EML6Q6ZMW3 1958 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 TNRC6AQ8NDV7 1962 aaKnown RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 IGHV1-45A0A0A0MS14 117 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 NSG1A0A0A6YYJ2 146 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 WWP2O00308 870 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 CLPSP04118 112 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 ATP1B1P05026 303 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 PABPC4LP0CB38 370 aaKnown RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 S1PR1P21453 382 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 FPR1P21462 350 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 FMO3P31513 532 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 ISL1P61371 349 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 IGLV3-21P80748 117 aaPredicted RBP11.18□□□□□ -0.62
NIP7-201ENST00000254940 RBBP4Q09028 425 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 NEDD8Q15843 81 aa11.18□□□□□ -0.62
NIP7-201ENST00000254940 GPAT3Q53EU6 434 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms