RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SFXN1Q9H9B4 322 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 GPN1Q9HCN4 374 aaPredicted RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 TRIM36Q9NQ86 728 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 RYDENQ9NUL5 291 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 PCDHGB6Q9Y5F9 930 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 A0A0B4J293 547 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 LRIT2A6NDA9 550 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 CASC3O15234 703 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 PTTG1O95997 202 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 BCL6P41182 706 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 GBX2P52951 348 aaPredicted RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 OR2B6P58173 313 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 DLX2Q07687 328 aaPredicted RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 ZMAT1Q5H9K5 638 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SYCE2Q6PIF2 218 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SMARCD2Q92925 531 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 RIT1Q92963 219 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 HS6ST2Q96MM7 605 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 CD180Q99467 661 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 TRMT61BQ9BVS5 477 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 GSDMCQ9BYG8 508 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 MMP28Q9H239 520 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 CLDN16Q9Y5I7 305 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 EXPH5Q8NEV8 1989 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 A0A1W2PR48 441 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 IGLON5A6NGN9 336 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 H3BQ06 376 aaPredicted RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 PRKYO43930 277 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ICMTO60725 284 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ITGA10O75578 1167 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 RASGRP1O95267 797 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ZNF3P17036 446 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 C5AR1P21730 350 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ATP5A1P25705 553 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 RAB28P51157 221 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 TEKQ02763 1124 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SPHARQ15513 63 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 ITPRIPL2Q3MIP1 535 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 JAZF1Q86VZ6 243 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SNX33Q8WV41 574 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 SARGQ9BW04 601 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 HDAC8Q9BY41 377 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 DDX31Q9H8H2 851 aaKnown RBP8.6□□□□□ -1.03
RPA1-201ENST00000254719 SLC28A3Q9HAS3 691 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 TBC1D24Q9ULP9 559 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SCML1Q9UN30 329 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
RPA1-201ENST00000254719 SPTBP11277 2137 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 MAN2B1O00754 1011 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 TLX2O43763 284 aaPredicted RBP8.59□□□□□ -1.03
RPA1-201ENST00000254719 NUDT14O95848 222 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 PRKCAP17252 672 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ACSL1P33121 698 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ACTR1BP42025 376 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 GRK6P43250 576 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ACTR1AP61163 376 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 RPS15AP62244 130 aaKnown RBP8.59□□□□□ -1.03
RPA1-201ENST00000254719 PPP3R1P63098 170 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 DUSP8Q13202 625 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 GINS1Q14691 196 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 TMEM201Q5SNT2 666 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 WDR88Q6ZMY6 472 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 OR4K14Q8NGD5 310 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 SIPA1Q96FS4 1042 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 TSSK6Q9BXA6 273 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ASPNQ9BXN1 380 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 A4GALTQ9NPC4 353 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ACSS1Q9NUB1 689 aaPredicted RBP8.59□□□□□ -1.03
RPA1-201ENST00000254719 ANKMY1Q9P2S6 941 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 BAIAP2Q9UQB8 552 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 NTNG1Q9Y2I2 539 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 MED31Q9Y3C7 131 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 WDR45Q9Y484 360 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 CLEC3AO75596 197 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 SNX4O95219 450 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 TACSTD2P09758 323 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 IL9P15248 144 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 DDCP20711 480 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 REEP5Q00765 189 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 SRSF5Q13243 272 aaKnown RBP8.59□□□□□ -1.03
RPA1-201ENST00000254719 PXDC1Q5TGL8 231 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 XKRXQ6PP77 449 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 ZER1Q7Z7L7 766 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 GPR135Q8IZ08 494 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 TCEANCQ8N8B7 351 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 OR2M4Q96R27 311 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 NDC1Q9BTX1 674 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 SP140LQ9H930 580 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 STUB1Q9UNE7 303 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 GTF2A1LQ9UNN4 478 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 CMAHPQ9Y471 501 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 V9GYH0 126 aa8.59□□□□□ -1.03
RPA1-201ENST00000254719 H3BUI4 141 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms