RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 C5orf42Q9H799 3197 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 A0A0B4J293 547 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 RNF31Q96EP0 1072 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 SNX18Q96RF0 628 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 SCO2O43819 266 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
LRP3-201ENST00000253193 FAM209AQ5JX71 171 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 KXD1Q9BQD3 176 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 MAN2C1Q9NTJ4 1040 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 PLEKHB1Q9UF11 243 aaPredicted RBP17.26■□□□□ 0.35
LRP3-201ENST00000253193 ZNF222Q9UK12 451 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 CA5BQ9Y2D0 317 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 MAU2Q9Y6X3 613 aa17.26■□□□□ 0.35
LRP3-201ENST00000253193 TRA2BP62995 288 aaKnown RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 CDK5Q00535 292 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 PRPF38BQ5VTL8 546 aaKnown RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 TANGO2Q6ICL3 276 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 SLC48A1Q6P1K1 146 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 NOXA1Q86UR1 476 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 AMIGO1Q86WK6 493 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 LRRC25Q8N386 305 aaPredicted RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 ACBD7Q8N6N7 88 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 OR4K14Q8NGD5 310 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 KCNN2Q9H2S1 579 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 MIXL1Q9H2W2 232 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 SPACA6W5XKT8 324 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 ORC5O43913 435 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 MSL3P1P0C860 447 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 POLR2CP19387 275 aaPredicted RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 GDI1P31150 447 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 RUNX3Q13761 415 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 CLPPQ16740 277 aaPredicted RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 ZC3H14Q6PJT7 736 aaKnown RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 FANK1Q8TC84 345 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 SMAP2Q8WU79 429 aaPredicted RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 APOBEC4Q8WW27 367 aaKnown RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 C1QTNF7Q9BXJ2 289 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 B4DXG7 233 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 LYRM1O43325 122 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 GYPBP06028 91 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 HYAL2Q12891 473 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 PGGHGQ32M88 737 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
LRP3-201ENST00000253193 MORN4Q8NDC4 146 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 CCDC3Q9BQI4 270 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 SLC17A9Q9BYT1 436 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 IRF2BPLQ9H1B7 796 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 TRAPPC4Q9Y296 219 aa17.25■□□□□ 0.35
LRP3-201ENST00000253193 ARID1BQ8NFD5 2236 aaPredicted RBP17.24■□□□□ 0.35
LRP3-201ENST00000253193 TRAV6A0A075B6T7 132 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 LDB3O75112 727 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 LIMS3P0CW19 117 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 LIMS4P0CW20 117 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 GJA4P35212 333 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 RASSF6Q6ZTQ3 369 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 ETFBKMTQ8IXQ9 262 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 NKIRAS2Q9NYR9 191 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 ERVH48-1M5A8F1 160 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 HRO43593 1189 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 KIR2DL3P43628 341 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 GPLD1P80108 840 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 GDF7Q7Z4P5 450 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 OR7G1Q8NGA0 311 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 OR51L1Q8NGJ5 315 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 OR4C6Q8NH72 309 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 ZNF671Q8TAW3 534 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 SLC7A6Q92536 515 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 TSACCQ96A04 125 aaPredicted RBP17.24■□□□□ 0.35
LRP3-201ENST00000253193 MOAP1Q96BY2 351 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 APOBEC3BQ9UH17 382 aaKnown RBP17.24■□□□□ 0.35
LRP3-201ENST00000253193 HSPB11Q9Y547 144 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 IGKV1-8A0A0C4DH67 115 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 B3GALT2O43825 422 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 DDOSTP39656 456 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 SLC37A3Q8NCC5 494 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 SLC35A4Q96G79 324 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 DHRS1Q96LJ7 313 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 SLC6A20Q9NP91 592 aa17.24■□□□□ 0.35
LRP3-201ENST00000253193 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.24■□□□□ 0.35
LRP3-201ENST00000253193 TMEM129A0AVI4 362 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 PRR23D1E9PI22 279 aaPredicted RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 INMT-MINDY4F8WBC2 141 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 AKR7A2O43488 359 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 LALBAP00709 142 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 PRR23D2P0DMB1 279 aaPredicted RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 STAT5AP42229 794 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 ADAM15Q13444 863 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 SMUG1Q53HV7 270 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 FAM98AQ8NCA5 519 aaKnown RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 RERGQ96A58 199 aaPredicted RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 COX14Q96I36 57 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 ATP13A2Q9NQ11 1180 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 PRDM7Q9NQW5 492 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 SCN8AQ9UQD0 1980 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 HYAL3O43820 417 aaPredicted RBP17.23■□□□□ 0.35
LRP3-201ENST00000253193 F3P13726 295 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 C19orf48Q6RUI8 117 aa17.23■□□□□ 0.35
LRP3-201ENST00000253193 ASPGQ86U10 573 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms