RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RNF113BQ8IZP6 322 aaKnown RBP3.9□□□□□ -1.79
UBE4A-201ENST00000252108 CADM2Q8N3J6 435 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 ARHGEF39Q8N4T4 335 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 OR9Q2Q8NGE9 314 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 OR5M3Q8NGP4 307 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM19Q96HH6 336 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 MARVELD1Q9BSK0 173 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 MMP28Q9H239 520 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 DPEP2Q9H4A9 486 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 MTG2Q9H4K7 406 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 MRPS18AQ9NVS2 196 aaKnown RBP3.9□□□□□ -1.79
UBE4A-201ENST00000252108 FBXL12Q9NXK8 326 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 REV1Q9UBZ9 1251 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 FTSJ1Q9UET6 329 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 HEBP2Q9Y5Z4 205 aa3.9□□□□□ -1.79
UBE4A-201ENST00000252108 ANKRD61A6NGH8 418 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FFAR1O14842 300 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GPRIN2O60269 458 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CREBL2O60519 120 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TPST2O60704 377 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 UBXN7O94888 489 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TPOP07202 933 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FURINP09958 794 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FSHRP23945 695 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 EVX1P49640 407 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 MAN2A2P49641 1150 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ABATP80404 500 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CAMK2BQ13554 666 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GALEQ14376 348 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CCSMST1Q4G0I0 132 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SAXO2Q658L1 398 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM220Q6QAJ8 160 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 WDR53Q7Z5U6 358 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SPAG16Q8N0X2 631 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 C7orf57Q8NEG2 295 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GLYATL1Q969I3 302 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CD180Q99467 661 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 THAP7Q9BT49 309 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PPIL3Q9H2H8 161 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SPNS1Q9H2V7 528 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 KLHL31Q9H511 634 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 C11orf49Q9H6J7 331 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 IL20Q9NYY1 176 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TNRC6BQ9UPQ9 1833 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 C17orf113A0A1B0GUU1 675 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 EMC8O43402 210 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 HLA-DQB1P01920 261 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RAF1P04049 648 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 KLK1P06870 262 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CSF3P09919 207 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RAB40ALP0C0E4 278 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLC35G4P0C7Q5 338 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TIMP2P16035 220 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 LAG3P18627 525 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PBLDP30039 288 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLC6A6P31641 620 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FEN1P39748 380 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CTBP2P56545 445 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SNTB2Q13425 540 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FAM71E1Q6IPT2 247 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLC9B2Q86UD5 537 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 IQCHQ86VS3 1027 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CACUL1Q86Y37 369 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR10Q1Q8NGQ4 319 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RAB40AQ8WXH6 277 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR8D1Q8WZ84 308 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TCEAL4Q96EI5 215 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 S100A16Q96FQ6 103 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR5M11Q96RB7 305 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TIMP4Q99727 224 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 PDCD10Q9BUL8 212 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ASF1AQ9Y294 204 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CHST2Q9Y4C5 530 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CLCA3PQ9Y6N3 262 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 LAMP2P13473 410 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 HK1P19367 917 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CELP19835 753 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ELAVL4P26378 380 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR1E2P47887 323 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ETV1P50549 477 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TSPAN5P62079 268 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 CYP4F8P98187 520 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ZNHIT3Q15649 155 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 C9orf64Q5T6V5 341 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ZBTB37Q5TC79 503 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 NXNL2Q5VZ03 156 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TXNDC8Q6A555 127 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 EIF5AL1Q6IS14 154 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 TNFAIP8L2Q6P589 184 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SNX29P2Q8IUI4 249 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 GALNT11Q8NCW6 608 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 FLVCR1-AS1Q8TAF5 88 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ACOT11Q8WXI4 607 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SLC9A6Q92581 669 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF582Q96NG8 517 aaPredicted RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 SECISBP2Q96T21 854 aaKnown RBP3.89□□□□□ -1.79
UBE4A-201ENST00000252108 MCOLN1Q9GZU1 580 aa3.89□□□□□ -1.79
UBE4A-201ENST00000252108 RHBGQ9H310 441 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms