RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 C11orf74Q86VG3 221 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 GALNT12Q8IXK2 581 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 OSTF1Q92882 214 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 PRRG3Q9BZD7 231 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 GPR52Q9Y2T5 361 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 GXYLT2A0PJZ3 443 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 CBFA2T3O75081 653 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 GPX5O75715 221 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 ENDOUP21128 410 aaKnown RBP23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 GABRA3P34903 492 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 SOX3P41225 446 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 POU6F2P78424 691 aaPredicted RBP23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 KLHL22Q53GT1 634 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 FIGNL1Q6PIW4 674 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 OR4Q3Q8NH05 313 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 HOXB13Q92826 284 aaPredicted RBP23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 PRSS27Q9BQR3 290 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 POLR2J2Q9GZM3 115 aaKnown RBP23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 IL20Q9NYY1 176 aa23.41■■□□□ 1.34
TMEM55B-201ENST00000250489 MYL12BO14950 172 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 CSF2P04141 144 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 HTR2AP28223 471 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 IFITM3Q01628 133 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 VWA5B2Q8N398 1253 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 ARL14Q8N4G2 192 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 DEFB119Q8N690 84 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 OR52R1Q8NGF1 315 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 RHBDL2Q9NX52 303 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 NLGN3Q9NZ94 848 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 A0A0A6YYC8 382 aaPredicted RBP23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 TRAPPC13A5PLN9 417 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 CDHR4A6H8M9 788 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 KDM4EB2RXH2 506 aaPredicted RBP23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 I3L1I5 382 aaPredicted RBP23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 BRINP1O60477 761 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 NKX2-2O95096 273 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 MED26O95402 600 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 FASLGP48023 281 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 ZNF155Q12901 538 aaPredicted RBP23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 ZNF620Q6ZNG0 422 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 CYP4Z2PQ8N1L4 340 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 RBCK1Q9BYM8 510 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 CA14Q9ULX7 337 aa23.4■■□□□ 1.34
TMEM55B-201ENST00000250489 DNAH14Q0VDD8 3507 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 SNTNA6NMZ2 147 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 OR10H2O60403 315 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 GKN3PP0CG01 181 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 NME1P15531 152 aaKnown RBP23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 ETV5P41161 510 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 ETV1P50549 477 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 MLLT11Q13015 90 aaPredicted RBP23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 C1DQ13901 141 aaKnown RBP23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 ELOCQ15369 112 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 MINDY4Q4G0A6 757 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 C3orf38Q5JPI3 329 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 SLC30A6Q6NXT4 461 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 ANKK1Q8NFD2 765 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 PMM1Q92871 262 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 RNFT2Q96EX2 444 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 C6orf62Q9GZU0 229 aaPredicted RBP23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 FGF20Q9NP95 211 aaPredicted RBP23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 POLE3Q9NRF9 147 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 CDH10Q9Y6N8 788 aa23.39■■□□□ 1.33
TMEM55B-201ENST00000250489 TMEM131Q92545 1883 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 A0A1W2PR77 199 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 IRGMA1A4Y4 181 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 SRPX2O60687 465 aaPredicted RBP23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 COQ9O75208 318 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 CD27P26842 260 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 RNF144AP50876 292 aaPredicted RBP23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 PSMD7P51665 324 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 RAB40BQ12829 278 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 SNX29P2Q8IUI4 249 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 MAP3K3Q99759 626 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 KRCC1Q9NPI7 259 aaPredicted RBP23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 HCN3Q9P1Z3 774 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 CDC42EP2O14613 210 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 LYPD3O95274 346 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 S1PR1P21453 382 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 CAPZBP47756 277 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 OR1Q1Q15612 314 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 PGGHGQ32M88 737 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 CLDN22Q8N7P3 220 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 DRAXINQ8NBI3 349 aaPredicted RBP23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 MROQ9BYG7 248 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 NDUFB11Q9NX14 153 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 SEC14L4Q9UDX3 406 aa23.38■■□□□ 1.33
TMEM55B-201ENST00000250489 METTL12A8MUP2 240 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 KPNA4O00629 521 aaPredicted RBP23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 SURF4O15260 269 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 FOXS1O43638 330 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 PROS1P07225 676 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 PTNP21246 168 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 CD38P28907 300 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 PPP5CP53041 499 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 PERM1Q5SV97 790 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 WDR88Q6ZMY6 472 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 ZAR1Q86SH2 424 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 LMX1AQ8TE12 382 aa23.37■■□□□ 1.33
TMEM55B-201ENST00000250489 PPP1R14BQ96C90 147 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms