RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 NTNG1Q9Y2I2 539 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 WDR45Q9Y484 360 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 CDH10Q9Y6N8 788 aa15.33■□□□□ 0.04
HOXD3-201ENST00000249440 SLC35G6P0C7Q6 338 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF888P0CJ79 500 aaPredicted RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 CPN2P22792 545 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 CAV3P56539 151 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 GPM6BQ13491 265 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF362Q5T0B9 420 aaPredicted RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 VN1R4Q7Z5H5 301 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ASPGQ86U10 573 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ARIH2OSQ8N7S6 290 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 DEPDC7Q96QD5 511 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 SECISBP2Q96T21 854 aaKnown RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 HDHD5Q9BXW7 423 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 PBX4Q9BYU1 374 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 SLC7A7Q9UM01 511 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 FAM172BPA6NC97 362 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 PLRG1O43660 514 aaKnown RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 NDUFS1P28331 727 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 TNFRSF17Q02223 184 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF155Q12901 538 aaPredicted RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ARHGAP11BQ3KRB8 267 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 TBRG1Q3YBR2 411 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 LCN1P1Q5VSP4 162 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 METAP1DQ6UB28 335 aaPredicted RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 OR4K14Q8NGD5 310 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 NEIL3Q8TAT5 605 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 SCARF2Q96GP6 870 aaPredicted RBP15.32■□□□□ 0.04
HOXD3-201ENST00000249440 FCRL4Q96PJ5 515 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 GDF15Q99988 308 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF649Q9BS31 505 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 MARCH7Q9H992 704 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 PHF11Q9UIL8 331 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 CBLCQ9ULV8 474 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 POLHQ9Y253 713 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 CSNK1G3Q9Y6M4 447 aa15.32■□□□□ 0.04
HOXD3-201ENST00000249440 BTN3A3O00478 584 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 HCN1O60741 890 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SLC2A2P11168 524 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 CFL1P23528 166 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 MAT2AP31153 395 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SOX9P48436 509 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 EIPR1Q53HC9 387 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 OR2L13Q8N349 312 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 C19orf18Q8NEA5 215 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 ENKURQ8TC29 256 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SPRYD4Q8WW59 207 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SLC22A18Q96BI1 424 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 FRMD6Q96NE9 622 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 JAM3Q9BX67 310 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 FGF22Q9HCT0 170 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 TNFRSF10DQ9UBN6 386 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 IL20RAQ9UHF4 553 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 B4DXG7 233 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 FAM47E-STBD1D6RA91 191 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 GABRPO00591 440 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 PIP5K1CO60331 668 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 TCEA1P23193 301 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SSTR4P31391 388 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 GCGRP47871 477 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 MRPS15P82914 257 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 DUSP8Q13202 625 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 SUZ12Q15022 739 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF836Q6ZNA1 936 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 RANBP3LQ86VV4 465 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 MARCH9Q86YJ5 346 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 BBS1Q8NFJ9 593 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 NT5CQ8TCD5 201 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 DNAJA4Q8WW22 397 aaPredicted RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 OR2M4Q96R27 311 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 PLA2G2FQ9BZM2 168 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 RNF121Q9H920 327 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 ASB6Q9NWX5 421 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D29Q9UFV1 150 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 KLF15Q9UIH9 416 aa15.31■□□□□ 0.04
HOXD3-201ENST00000249440 NDRG2Q9UN36 371 aaKnown RBP15.31■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3DA0A087WVF3 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3IA0A087WXS9 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PRSS38A1L453 326 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3LB9A6J9 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 CDC42EP2O14613 210 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PLA2G10O15496 165 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SLC2A10O95528 541 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3HP0C7X1 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PAICSP22234 425 aaKnown RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 GALP22466 123 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 MYL9P24844 172 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PTBP1P26599 531 aaKnown RBP eCLIP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 APEX1P27695 318 aaKnown RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TLX1P31314 330 aaPredicted RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TRIQKQ629K1 86 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 TBC1D3CQ6IPX1 549 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 MZT2AQ6P582 158 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 CNIH2Q6PI25 160 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF322Q6U7Q0 402 aaPredicted RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 CPOQ8IVL8 374 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms