RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CFHR1Q03591 330 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 TIGD6Q17RP2 521 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 WDR45BQ5MNZ6 344 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 PLAG1Q6DJT9 500 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 RASSF6Q6ZTQ3 369 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 RRM2BQ7LG56 351 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 FAM26EQ8N5C1 309 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 OR8D4Q8NGM9 314 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 VSTM2LQ96N03 204 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 TAS2R16Q9NYV7 291 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 SLC7A7Q9UM01 511 aa17.16■□□□□ 0.34
HOXC11-201ENST00000243082 KLF4O43474 513 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 NUDT21O43809 227 aaKnown RBP17.15■□□□□ 0.34
HOXC11-201ENST00000243082 SOX30O94993 753 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 ENTPD1P49961 510 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 EMP3P54852 163 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 MLLT10P55197 1068 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 LSM3P62310 102 aaKnown RBP17.15■□□□□ 0.34
HOXC11-201ENST00000243082 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
HOXC11-201ENST00000243082 SLC25A30Q5SVS4 291 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 MFSD4BQ5TF39 518 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 MBOAT2Q6ZWT7 520 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 RANBP3LQ86VV4 465 aaPredicted RBP17.15■□□□□ 0.34
HOXC11-201ENST00000243082 SLC35F3Q8IY50 421 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 TOR1AIP2Q8NFQ8 470 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 OR51Q1Q8NH59 317 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 AHCYL2Q96HN2 611 aaKnown RBP17.15■□□□□ 0.34
HOXC11-201ENST00000243082 DTX4Q9Y2E6 619 aa17.15■□□□□ 0.34
HOXC11-201ENST00000243082 A0A1B0GVG6 124 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 H0YIG0 161 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 TLX2O43763 284 aaPredicted RBP17.14■□□□□ 0.34
HOXC11-201ENST00000243082 INHBBP09529 407 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 CD1CP29017 333 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 GPR3P46089 330 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 SMSP52788 366 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 HSD17B7P56937 341 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 VBP1P61758 197 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 GRM7Q14831 915 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 MRGPREQ86SM8 312 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 NRMQ8IXM6 262 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 OR4N2Q8NGD1 307 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 C9orf43Q8TAL5 461 aaPredicted RBP17.14■□□□□ 0.34
HOXC11-201ENST00000243082 RPL3LQ92901 407 aaKnown RBP17.14■□□□□ 0.34
HOXC11-201ENST00000243082 CRELD1Q96HD1 420 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 DGAT2Q96PD7 388 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 PRSS27Q9BQR3 290 aa17.14■□□□□ 0.34
HOXC11-201ENST00000243082 SDK1Q7Z5N4 2213 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 CACNA1IQ9P0X4 2223 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 TP53BP1Q12888 1972 aaPredicted RBP17.14■□□□□ 0.33
HOXC11-201ENST00000243082 HYAL3O43820 417 aaPredicted RBP17.14■□□□□ 0.33
HOXC11-201ENST00000243082 PIP5K1CO60331 668 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 IGKV1D-16P01601 117 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 FPR3P25089 353 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF267Q14586 743 aaPredicted RBP17.14■□□□□ 0.33
HOXC11-201ENST00000243082 ZBTB46Q86UZ6 589 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 POGLUT1Q8NBL1 392 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 POLR2J2Q9GZM3 115 aaKnown RBP17.14■□□□□ 0.33
HOXC11-201ENST00000243082 OCEL1Q9H607 264 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 ERVMER34-1Q9H9K5 563 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 CSNK1G3Q9Y6M4 447 aa17.14■□□□□ 0.33
HOXC11-201ENST00000243082 TRAPPC13A5PLN9 417 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF749O43361 778 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 CLPXO76031 633 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 LYPD3O95274 346 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 GUSBP08236 651 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 SEPHS1P49903 392 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 NCS1P62166 190 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF91Q05481 1191 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 OR1Q1Q15612 314 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 ZNHIT3Q15649 155 aaPredicted RBP17.13■□□□□ 0.33
HOXC11-201ENST00000243082 FLYWCH1Q4VC44 716 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 SLC46A3Q7Z3Q1 461 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 LSRQ86X29 649 aaPredicted RBP17.13■□□□□ 0.33
HOXC11-201ENST00000243082 UBALD2Q8IYN6 164 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 TEX47Q8TBZ9 253 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 TSSK6Q9BXA6 273 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 ENAMQ9NRM1 1142 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 RPL36Q9Y3U8 105 aaKnown RBP17.13■□□□□ 0.33
HOXC11-201ENST00000243082 MAU2Q9Y6X3 613 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 FMO6PO60774 539 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 CNOT3O75175 753 aaKnown RBP17.13■□□□□ 0.33
HOXC11-201ENST00000243082 DBTP11182 482 aaKnown RBP17.13■□□□□ 0.33
HOXC11-201ENST00000243082 MYF5P13349 255 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 GLB1P16278 677 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 DRD5P21918 477 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 STAT5AP42229 794 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 GPR4P46093 362 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 RFX3P48380 749 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 FUT7Q11130 342 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 SHBQ15464 509 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 AMZ1Q400G9 498 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 SYT14P1Q58G82 188 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 MEDAGQ5VYS4 303 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 SLC27A4Q6P1M0 643 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 NPSR1Q6W5P4 371 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 WDR88Q6ZMY6 472 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 LGALS12Q96DT0 336 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 OR5M11Q96RB7 305 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms