RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF676Q8N7Q3 588 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ELOA3Q8NG57 546 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 FATE1Q969F0 183 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 NKD1Q969G9 470 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 UTS2RQ9UKP6 389 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 CPED1A4D0V7 1026 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PHOX2AO14813 284 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 THP07101 528 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 SDHAP31040 664 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 RAB1AP62820 205 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PDZD11Q5EBL8 140 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 KIAA0319Q5VV43 1072 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 TMEM71Q6P5X7 295 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 DPPA4Q7L190 304 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 OLIG1Q8TAK6 271 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 CHTF18Q8WVB6 975 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ARFGEF2Q9Y6D5 1785 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 BRINP1O60477 761 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PTPRRQ15256 657 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 OR52W1Q6IF63 320 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ABHD13Q7L211 337 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 DDX53Q86TM3 631 aaKnown RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 GLYATL2Q8WU03 294 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 UBXN10Q96LJ8 280 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 MARCH4Q9P2E8 410 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 MED16Q9Y2X0 877 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 MAGEB4O15481 346 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 DNAJB6O75190 326 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PTGFRP43088 359 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 FXYD6P3P58550 94 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 MCCD1P59942 119 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PCBP2Q15366 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 CBLN2Q8IUK8 224 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 NXPE1Q8N323 547 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 NPY6RQ99463 290 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 AP5M1Q9H0R1 490 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 PRO1933Q9H354 126 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ASB6Q9NWX5 421 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ICKQ9UPZ9 632 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 GPR31O00270 319 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 PGAM2P15259 253 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 MLIPQ5VWP3 458 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 TTLL10Q6ZVT0 673 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 COMMD2Q86X83 199 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SYNPRQ8TBG9 265 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SLC22A31A6NKX4 558 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 RECQL4O94761 1208 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 PRSS23O95084 383 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 C1GALT1C1LP0DN25 315 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 C5AR1P21730 350 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 OR3A2P47893 321 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ACTA2P62736 377 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ACTG2P63267 376 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 FAM171A1Q5VUB5 890 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 OR5M10Q6IEU7 315 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 FAHD1Q6P587 224 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 NDUFAF7Q7L592 441 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 THRSPQ92748 146 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ATF6BQ99941 703 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 OR2C1O95371 312 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 MRPL3P09001 348 aaKnown RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ANXA7P20073 488 aaKnown RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 UBE2KP61086 200 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 GLO1Q04760 184 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 FRMD1Q8N878 549 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 PLPP5Q8NEB5 264 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 PSMG2Q969U7 264 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SHARPINQ9H0F6 387 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 TMEM27Q9HBJ8 222 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 HIF3AQ9Y2N7 669 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 RPN2P04844 631 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 HOXC8P31273 242 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 MAP3K8P41279 467 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 RAD52P43351 418 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 CLECL1Q8IZS7 167 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 NIPSNAP1Q9BPW8 284 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 TSPAN10Q9H1Z9 355 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 HHATLQ9HCP6 504 aa12.16□□□□□ -0.46
VAMP4-201ENST00000236192 NLE1Q9NVX2 485 aaPredicted RBP12.16□□□□□ -0.46
VAMP4-201ENST00000236192 AK6Q9Y3D8 172 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms