RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 M0R3H8 397 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CYB5BO43169 146 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MPIG6BO95866 241 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CPOXP36551 454 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 XCR1P46094 333 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MTNR1AP48039 350 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 PRKXP51817 358 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 ADARB1P78563 741 aaKnown RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 SPHARQ15513 63 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TP53I3Q53FA7 332 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 LRRTM2O43300 516 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CDK3Q00526 305 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 OR8J1Q8NGP2 316 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 OR51Q1Q8NH59 317 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CHRDQ9H2X0 955 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM184BQ9Y519 407 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 NAV1Q8NEY1 1877 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CREBL2O60519 120 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 JRKO75564 520 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 IFNA4P05014 189 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 LAMP1P11279 417 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 DCST2Q5T1A1 773 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 XKR5Q6UX68 686 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 VWA5B2Q8N398 1253 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 WDTC1Q8N5D0 677 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 OR5D16Q8NGK9 328 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 GIMAP5Q96F15 307 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 DMRT3Q9NQL9 472 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CD63P08962 238 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CHMP24386 653 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 LTC4SQ16873 150 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 TMEM184AQ6ZMB5 413 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 CDHR3Q6ZTQ4 885 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 RHBDF1Q96CC6 855 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 ZMYND19Q96E35 227 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-201ENST00000225964 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MYADMQ96S97 322 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 GCM1Q9NP62 436 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 GDE1Q9NZC3 331 aa12.5□□□□□ -0.41
COL1A1-201ENST00000225964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MSR1P21757 451 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 RGS6P49758 472 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 ZNF181Q2M3W8 571 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 NADSYN1Q6IA69 706 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 OR5M10Q6IEU7 315 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 TMEFF1Q8IYR6 380 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 IL1F10Q8WWZ1 152 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 TBC1D20Q96BZ9 403 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 CNIH4Q9P003 139 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SLC6A14Q9UN76 642 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 ENSAO43768 121 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 HMGCLP35914 325 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 ERVPABLB-1P60509 514 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MEX3DQ86XN8 651 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 RBM12BQ8IXT5 1001 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SLC12A9Q9BXP2 914 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 NDUFB2O95178 105 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 CHRM4P08173 479 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MMP2P08253 660 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 HTR2AP28223 471 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 IDUAP35475 653 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MOGSQ13724 837 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 HYAL4Q2M3T9 481 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 LCTLQ6UWM7 567 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 PPP1R3BQ86XI6 285 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 FAM217AQ8IXS0 508 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 HSD3B7Q9H2F3 369 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 OR14J1Q9UGF5 321 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SRPK3Q9UPE1 567 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 MYH6P13533 1939 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 FAM189A1O60320 539 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SLC6A11P48066 632 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 IL20RBQ6UXL0 311 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 SIAH1Q8IUQ4 282 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 OR4K15Q8NH41 348 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
COL1A1-201ENST00000225964 BOKQ9UMX3 212 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms