RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF891A8MT65 544 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 S1PR1P21453 382 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ACVR1BP36896 505 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CSNK1A1P48729 337 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CTXN1P60606 82 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 KIR3DX1Q9H7L2 352 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 INTS6Q9UL03 887 aaKnown RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 GPR52Q9Y2T5 361 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CD1CP29017 333 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 PPIAP62937 165 aaKnown RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 LANCL3Q6ZV70 420 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ISCA2Q86U28 154 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 WDR20Q8TBZ3 569 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CCDC115Q96NT0 180 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ACTR6Q9GZN1 396 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 MED28Q9H204 178 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CLEC1BQ9P126 229 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ANTXRLA6NF34 631 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 IDUAP35475 653 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 AHRP35869 848 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CDH11P55287 796 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 FOXA1P55317 472 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CDKL1Q00532 357 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 LRRC37A5PQ49AS3 106 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 GTDC1Q4AE62 458 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 TMEM207Q6UWW9 146 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 TMEM19Q96HH6 336 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 A0A1W2PRQ8 180 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 F5H5K5 113 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 TNFSF12O43508 249 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 DDCP20711 480 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 KCNAB2Q13303 367 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 CLCA4Q14CN2 919 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 KIAA1614Q5VZ46 1190 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 LILRA6Q6PI73 481 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 OR51L1Q8NGJ5 315 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 LKAAEAR1Q8TD35 194 aa12.91□□□□□ -0.34
SIX4-201ENST00000216513 WDR12Q9GZL7 423 aaKnown RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 GPN1Q9HCN4 374 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
SIX4-201ENST00000216513 ATXN7O15265 892 aaPredicted RBP12.9□□□□□ -0.34
SIX4-201ENST00000216513 OCLNQ16625 522 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 LEG1Q6P5S2 330 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 OR51G2Q8NGK0 314 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ASB11Q8WXH4 323 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 TAMM41Q96BW9 452 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 MROQ9BYG7 248 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 CST11Q9H112 138 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
SIX4-201ENST00000216513 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PIAS2O75928 621 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ZNF806P0C7X5 589 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PCBP4P57723 403 aaKnown RBP12.9□□□□□ -0.34
SIX4-201ENST00000216513 DAG1Q14118 895 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 TCEAL1Q15170 157 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 C4orf46Q504U0 113 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ADNP2Q6IQ32 1131 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 LETMD1Q6P1Q0 360 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ASB12Q8WXK4 309 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 HS6ST2Q96MM7 605 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 C1orf21Q9H246 121 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 OBP2BQ9NPH6 170 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ZNF221Q9UK13 617 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 A0A096LPI6 279 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 HTRA2O43464 458 aaPredicted RBP12.9□□□□□ -0.34
SIX4-201ENST00000216513 VTCN1Q7Z7D3 282 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 INPP5KQ9BT40 448 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 DECR2Q9NUI1 292 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 LRFN1Q9P244 771 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PPT2Q9UMR5 302 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ANKRD28O15084 1053 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 C19orf48Q6RUI8 117 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 IQCF1Q8N6M8 205 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 GATAD2BQ8WXI9 593 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 SLC6A16Q9GZN6 736 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 CHST8Q9H2A9 424 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 TAS2R10Q9NYW0 307 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 IL2RAP01589 272 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 COL9A1P20849 921 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 CARD18P57730 90 aa12.9□□□□□ -0.34
SIX4-201ENST00000216513 ARPC4P59998 168 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms