RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 IL20RBQ6UXL0 311 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 FRRS1Q6ZNA5 592 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 LINC00696Q6ZRV3 163 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 PTRH1Q86Y79 214 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 RNF148Q8N7C7 305 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 OIT3Q8WWZ8 545 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 HGDQ93099 445 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 MCUR1Q96AQ8 359 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 EFHD2Q96C19 240 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 SECISBP2Q96T21 854 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 UTP23Q9BRU9 249 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 RUBCNLQ9H714 662 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 SUCOQ9UBS9 1254 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 PACSIN3Q9UKS6 424 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 MKLN1Q9UL63 735 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ANGPT4Q9Y264 503 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 EXPH5Q8NEV8 1989 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GSTA4O15217 222 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 HS6ST1O60243 411 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 UGT2B11O75310 529 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 WDPCPO95876 746 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 NGFRP08138 427 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TBXA2RP21731 343 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 CASRP41180 1078 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 PCBP3P57721 371 aaKnown RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 FBXW4P57775 412 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 BNIP2Q12982 314 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TUBA3CQ13748 450 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GPR68Q15743 365 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF141Q15928 474 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 FLYWCH1Q4VC44 716 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 SLC22A10Q63ZE4 541 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GLYATQ6IB77 296 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 IGFL3Q6UXB1 125 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 RTL4Q6ZR62 310 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ZAR1Q86SH2 424 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 HPS6Q86YV9 775 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GOLM1Q8NBJ4 401 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 SPPL2AQ8TCT8 520 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 RNF138Q8WVD3 245 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 EXTL1Q92935 676 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF607Q96SK3 696 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 TREX2Q9BQ50 279 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 MUC13Q9H3R2 512 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GORASP2Q9H8Y8 452 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 SH2D2AQ9NP31 389 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 UBQLN4Q9NRR5 601 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 GPC6Q9Y625 555 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-213ENST00000642137 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
LINC00339-213ENST00000642137 ANKRD33BA6NCL7 494 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 M0QX08 132 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CXCR6O00574 342 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 KIAA0513O60268 411 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 FADS1O60427 444 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 GMNNO75496 209 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 GCM2O75603 506 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-213ENST00000642137 SERPINB7O75635 380 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 UGT2B17O75795 530 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 PDE9AO76083 593 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 UTS2O95399 124 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 GGT1P19440 569 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 TCN1P20061 433 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-213ENST00000642137 KDELR2P33947 212 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CLK3P49761 638 aaKnown RBP11.31□□□□□ -0.6
LINC00339-213ENST00000642137 POLE2P56282 527 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 OC90Q02509 493 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-213ENST00000642137 LINC00303Q3SY05 128 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 OLIG3Q7RTU3 272 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 GALNT10Q86SR1 603 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF227Q86WZ6 799 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 KRT73Q86Y46 540 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CYP4Z2PQ8N1L4 340 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF527Q8NB42 609 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 FAM156AQ8NDB6 213 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 PAQR8Q8TEZ7 354 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 TM9SF4Q92544 642 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CLPTM1LQ96KA5 538 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CNTNAP3BQ96NU0 1288 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 NODALQ96S42 347 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
LINC00339-213ENST00000642137 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms