RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DACH2Q96NX9 599 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 TRNT1Q96Q11 434 aaKnown RBP8.24□□□□□ -1.09
PHGDH-219ENST00000641513 CTRCQ99895 268 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 BTBD2Q9BX70 525 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 WDR12Q9GZL7 423 aaKnown RBP8.24□□□□□ -1.09
PHGDH-219ENST00000641513 QRSL1Q9H0R6 528 aaKnown RBP8.24□□□□□ -1.09
PHGDH-219ENST00000641513 PIGUQ9H490 435 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 FOLH1BQ9HBA9 442 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 BCL2L10Q9HD36 194 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 MKKSQ9NPJ1 570 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-219ENST00000641513 LANCL2Q9NS86 450 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 KRT84Q9NSB2 600 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 FAIMQ9NVQ4 179 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 OCIAD1Q9NX40 245 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 VNN3Q9NY84 501 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 MKLN1Q9UL63 735 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 POFUT2Q9Y2G5 429 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 WDR45Q9Y484 360 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 GMPPBQ9Y5P6 360 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 GPC6Q9Y625 555 aaPredicted RBP8.24□□□□□ -1.09
PHGDH-219ENST00000641513 A3GALT2U3KPV4 340 aa8.24□□□□□ -1.09
PHGDH-219ENST00000641513 GXYLT2A0PJZ3 443 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 CLDN24A6NM45 220 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 J3KTA2 159 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 M0R3H8 397 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 HRKO00198 91 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TNFRSF10AO00220 468 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TNFRSF11BO00300 401 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 NTN3O00634 580 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 RGS10O43665 173 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PRAMEF2O60811 474 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 CBX7O95931 251 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 IFI6P09912 130 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PRKACGP22612 351 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ACP1P24666 158 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 KCNJ5P48544 419 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 SERPINB10P48595 397 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 CLK3P49761 638 aaKnown RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ENTPD1P49961 510 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 IL5RAQ01344 420 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 KCNC4Q03721 635 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 SPEM2Q0P670 501 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 NPRL3Q12980 569 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TRA2AQ13595 282 aaKnown RBP eCLIP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 GANABQ14697 944 aaKnown RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TBCEQ15813 527 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 CTF1Q16619 201 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ARHGAP11BQ3KRB8 267 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 DCST2Q5T1A1 773 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 RHBDD2Q6NTF9 364 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 QSOX2Q6ZRP7 698 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 SHISA6Q6ZSJ9 500 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 B3GNT8Q7Z7M8 397 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 VRK2Q86Y07 508 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 SLITRK4Q8IW52 837 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TMEM151BQ8IW70 566 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PEX5LQ8IYB4 626 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TAGAPQ8N103 731 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ATG16L2Q8NAA4 619 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 AGBL5Q8NDL9 886 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 GPR32P1Q8NGA4 272 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OR4C15Q8NGM1 316 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OR52P1PQ8NH57 321 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PHF10Q8WUB8 498 aaKnown RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 RORBQ92753 470 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TSLPQ969D9 159 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 YIPF6Q96EC8 236 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF578Q96N58 590 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF300Q96RE9 604 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 STACQ99469 402 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PIP5K1AQ99755 562 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 EDEM2Q9BV94 578 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 FUNDC2Q9BWH2 189 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PINK1Q9BXM7 581 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OR8D2Q9GZM6 311 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OR10A5Q9H207 317 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 OCEL1Q9H607 264 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 LIN28AQ9H9Z2 209 aaKnown RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 APMAPQ9HDC9 416 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 TMEM9BQ9NQ34 198 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 FBXO8Q9NRD0 319 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 FKBP14Q9NWM8 211 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PAK1IP1Q9NWT1 392 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 GALNT8Q9NY28 637 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 NDUFAF4Q9P032 175 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 PDP1Q9P0J1 537 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 AKAP7Q9P0M2 348 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 RHCGQ9UBD6 479 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 MKL2Q9ULH7 1088 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 SLC9A8Q9Y2E8 581 aa8.23□□□□□ -1.09
PHGDH-219ENST00000641513 HEMK1Q9Y5R4 338 aaPredicted RBP8.23□□□□□ -1.09
PHGDH-219ENST00000641513 CLCA3PQ9Y6N3 262 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms