RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CD93Q9NPY3 652 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ABCB10Q9NRK6 738 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 HRASLS2Q9NWW9 162 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 H2AFY2Q9P0M6 372 aaPredicted RBP11.32□□□□□ -0.6
CLN8-212ENST00000637083 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
CLN8-212ENST00000637083 FRS3O43559 492 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 FMO6PO60774 539 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 PTTG1O95997 202 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 EIF2S1P05198 315 aaKnown RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 CPEP16870 476 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 GABRG2P18507 467 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 NT5EP21589 574 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 BLKP51451 505 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 SKP1P63208 163 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 UBE2IP63279 158 aaKnown RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 DUSP5Q16690 384 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 ZNF836Q6ZNA1 936 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 SLC22A16Q86VW1 577 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 COX18Q8N8Q8 333 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 FAM3CQ92520 227 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 ZG16BQ96DA0 208 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CCDC3Q9BQI4 270 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 RNF167Q9H6Y7 350 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 C14orf105Q9NVL8 296 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CHST10O43529 356 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 COQ9O75208 318 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 IL1AP01583 271 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 HBQ1P09105 142 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CTSEP14091 401 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 TRHRP34981 398 aaPredicted RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 CRYBB2P43320 205 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 EEF1A1P68104 462 aaKnown RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 SOWAHCQ53LP3 525 aaPredicted RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 DCST2Q5T1A1 773 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 FHL5Q5TD97 284 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 RPL13AP3Q6NVV1 102 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 OR4N5Q8IXE1 308 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CSNK1A1LQ8N752 337 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 OR2T33Q8NG76 320 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 C6orf106Q9H6K1 298 aaPredicted RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 ADAP2Q9NPF8 381 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CLCA2Q9UQC9 943 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 GSTK1Q9Y2Q3 226 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 CDH10Q9Y6N8 788 aa11.31□□□□□ -0.6
CLN8-212ENST00000637083 MN1Q10571 1320 aaPredicted RBP11.31□□□□□ -0.6
CLN8-212ENST00000637083 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 LOC102723532A0A0G2JNH3 316 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SLC30A4O14863 429 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 TBX1O43435 398 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 GALR3O60755 368 aaPredicted RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 APOA1P02647 267 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SOX3P41225 446 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 CDH11P55287 796 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 RAB38P57729 211 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 TPBGQ13641 420 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 DSG2Q14126 1118 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 GPR68Q15743 365 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 EXOSC6Q5RKV6 272 aaKnown RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 KIAA0895LQ68EN5 471 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 TAF8Q7Z7C8 310 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 NRMQ8IXM6 262 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 POC5Q8NA72 575 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 AVL9Q8NBF6 648 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 UFD1Q92890 307 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 MSLNLQ96KJ4 702 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 GDF15Q99988 308 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 IL21RQ9HBE5 538 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 USP36Q9P275 1121 aaKnown RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 TMEM5Q9Y2B1 443 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 PCDHGB6Q9Y5F9 930 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 MDC1Q14676 2089 aaKnown RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 BLACEA4D250 179 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SURF4O15260 269 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 KLF4O43474 513 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 IGLV3-19P01714 112 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 GUSBP08236 651 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 NID1P14543 1247 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 RPS4Y1P22090 263 aaKnown RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 ETV5P41161 510 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 ETV1P50549 477 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 POU6F2P78424 691 aaPredicted RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLN8-212ENST00000637083 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms