RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SGTBQ96EQ0 304 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SENP5Q96HI0 755 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 FAR2Q96K12 515 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PRAP1Q96NZ9 151 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SERPINB11Q96P15 392 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 BBC3Q96PG8 261 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 ACOX2Q99424 681 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 FEVQ99581 238 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 EBNA1BP2Q99848 306 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 NIPSNAP1Q9BPW8 284 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TIPINQ9BVW5 301 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ERVK-6Q9BXR3 956 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 YIPF3Q9GZM5 350 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MIS12Q9H081 205 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ENKD1Q9H0I2 346 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PPP1R3EQ9H7J1 279 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PLGRKTQ9HBL7 147 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 Q9N2J8 555 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 VCX3AQ9NNX9 186 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ABCB9Q9NP78 766 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CTPS2Q9NRF8 586 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ADARB2Q9NS39 739 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 SEMA4GQ9NTN9 838 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MRPS18AQ9NVS2 196 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 LYARQ9NX58 379 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 TAS2R14Q9NYV8 317 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 JKAMPQ9P055 326 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MYOTQ9UBF9 498 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ADAM21Q9UKJ8 722 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 AGO1Q9UL18 857 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 RNF150Q9ULK6 438 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ICKQ9UPZ9 632 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TNNQ9UQP3 1299 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ZNF337Q9Y3M9 751 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PPIAL4AQ9Y536 164 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RIPK3Q9Y572 518 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 KIF24Q5T7B8 1368 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 EMSYQ7Z589 1322 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LOC105371242A0A075B767 164 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 A0A1W2PNV4 684 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PRSS37A4D1T9 235 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 A6NIZ1 184 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SAGE2PA6NJ88 616 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ADM5C9JUS6 153 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 E7EWF7 191 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 M0QXV9 152 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 M0QZK8 103 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PDHXO00330 501 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TCAPO15273 167 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 YY2O15391 372 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TEX33O43247 280 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZSCAN12O43309 604 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 XRCC2O43543 280 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LATO43561 262 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SLC28A2O43868 658 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CST8O60676 142 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TOM1O60784 492 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PRAF2O60831 178 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ENTPD5O75356 428 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SH3BGRLO75368 114 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PSMG1O95456 288 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ACTL6AO96019 429 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GOT2P00505 430 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 IFNA5P01569 189 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GCP02774 474 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TFP02787 698 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HIST1H2ABP04908 130 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 IFNA16P05015 189 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HOXC6P09630 235 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZDHHC11BP0C7U3 371 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SAGP10523 405 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ENO3P13929 434 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ST6GAL1P15907 406 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZNF182P17025 639 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 HIST1H2ADP20671 130 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZP3P21754 424 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 KCNA3P22001 575 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CXCR2P25025 360 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LAP3P28838 519 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GTF2E2P29084 291 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 CHRNA5P30532 468 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SHMT2P34897 504 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GJC1P36383 396 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 COILP38432 576 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TNFRSF4P43489 277 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SLCO1A2P46721 670 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 RGRP47804 291 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 UQCRFS1P47985 274 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GSSP48637 474 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GLUD2P49448 558 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 COMPP49747 757 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ASCL1P50553 236 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 BLKP51451 505 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PGDP52209 483 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HSPA2P54652 639 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MTCP1P56278 107 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CLDN18P56856 261 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DCDC1P59894 354 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LSM6P62312 80 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms