RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ARF3P61204 181 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 NRARPQ7Z6K4 114 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CYP4Z1Q86W10 505 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CCDC71Q8IV32 467 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 SRFBP1Q8NEF9 429 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 LMX1AQ8TE12 382 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 RDH12Q96NR8 316 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 RBM4BQ9BQ04 359 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 RBM4Q9BWF3 364 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 TMEM38AQ9H6F2 299 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TM9SF3Q9HD45 589 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ZNF451Q9Y4E5 1061 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 KIR2DS5A0A0G2JLQ3 304 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 A0A0G2JNG1 304 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 C5orf58C9J3I9 102 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 J3KTA2 159 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 KIR2DS3K7RE56 304 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 M0R082 166 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TSPAN4O14817 238 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SLC16A6O15403 523 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 BPNT1O95861 308 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CTSBP07858 339 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 NTSP30990 170 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 RFX2P48378 723 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 IL5RAQ01344 420 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 MVKQ03426 396 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TOP3AQ13472 1001 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 KIR2DS5Q14953 304 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ZNF630Q2M218 657 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 IQCCQ4KMZ1 466 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TMEM107Q6UX40 140 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 OR4M1Q8NGD0 313 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SUN3Q8TAQ9 357 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 PHF21AQ96BD5 680 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 HSPA12BQ96MM6 686 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 MMP27Q9H306 513 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 GPR27Q9NS67 375 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ACOXLQ9NUZ1 547 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 PCDHGB6Q9Y5F9 930 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SPAG17Q6Q759 2223 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 CELSR3Q9NYQ7 3312 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 HMGN4O00479 90 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 NDUFA2O43678 99 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SERPINI2O75830 405 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RRM2P31350 389 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 DDOSTP39656 456 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 BLKP51451 505 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ID2Q02363 134 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RBBP4Q09028 425 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 LTB4RQ15722 352 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SYPL1Q16563 259 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 HIPK1Q86Z02 1210 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 KAT2AQ92830 837 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 GAL3ST3Q96A11 431 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 OPALINQ96PE5 141 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ZFYVE21Q9BQ24 234 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 EQTNQ9NQ60 294 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TIGARQ9NQ88 270 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ACSS1Q9NUB1 689 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TNFRSF10DQ9UBN6 386 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ANGPT4Q9Y264 503 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 A0A1W2PQ72 361 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SYNDIG1LA6NDD5 238 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SAGE2PA6NJ88 616 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 CTDSP2O14595 271 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 BCKDKO14874 412 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SHOXO15266 292 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TNFSF14O43557 240 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 CD27P26842 260 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 DAPP51397 102 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 RUNX2Q13950 521 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 SLC48A1Q6P1K1 146 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 WDR53Q7Z5U6 358 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 OR9A2Q8NGT5 310 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 OR5H6Q8NGV6 325 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 RSPO3Q9BXY4 272 aaPredicted RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 REEP1Q9H902 201 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 TBC1D17Q9HA65 648 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 FAM60AQ9NP50 221 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 THUMPD1Q9NXG2 353 aaKnown RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 NDUFAF4Q9P032 175 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 MBD2Q9UBB5 411 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 PILRAQ9UKJ1 303 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 CES1P1Q9UKY3 287 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 ENTPD4Q9Y227 616 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 GADD45AP24522 165 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 HTR2BP41595 481 aa10.78□□□□□ -0.68
CLN6-217ENST00000636964 CSNK1EP49674 416 aaKnown RBP10.78□□□□□ -0.68
CLN6-217ENST00000636964 VSX2P58304 361 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms