RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 Q96MT0 163 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SCNM1Q9BWG6 230 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 TBL1XR1Q9BZK7 514 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 MMACHCQ9Y4U1 282 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 PLXND1Q9Y4D7 1925 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 TRBV11-1A0A0K0K1C0 115 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 FGF17O60258 216 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 CFHR1Q03591 330 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC48A1Q6P1K1 146 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SHQ1Q6PI26 577 aaKnown RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 WDR53Q7Z5U6 358 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ADCK1Q86TW2 530 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF566Q969W8 418 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 IL1RAPQ9NPH3 570 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ADAMTS9Q9P2N4 1935 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 USP34Q70CQ2 3546 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 A0A1W2PPW3 197 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 M0QX08 132 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ABCB7O75027 752 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ETV5P41161 510 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 DAPP51397 102 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 TMPRSS9Q7Z410 1059 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCDC71Q8IV32 467 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 RELTQ969Z4 430 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 DOHHQ9BU89 302 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 FBXO8Q9NRD0 319 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 KLRF1Q9NZS2 232 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 KCMF1Q9P0J7 381 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 SH3GLB1Q9Y371 365 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
SYNGAP1-207ENST00000628646 ARGFXA6NJG6 315 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 MITFO75030 526 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 IGHEP01854 428 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 FURINP09958 794 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCL11P51671 97 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 VLDLRP98155 873 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PLCXD2Q0VAA5 305 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 TGIF1Q15583 401 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 POMZP3Q6PJE2 187 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 HEATR5BQ9P2D3 2071 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 LOC100130705A0A1B0GUX0 176 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 ANKRD34CP0C6C1 535 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 ITGAMP11215 1152 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 UGT2B15P54855 530 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 FOXL2P58012 376 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 KDM4DQ6B0I6 523 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 REEP3Q6NUK4 255 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRR22Q8IZ63 422 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF540Q8NDQ6 660 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 MOAP1Q96BY2 351 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 C7orf34Q96L11 122 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 NODALQ96S42 347 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 DPH2Q9BQC3 489 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 METTL7AQ9H8H3 244 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 C2orf92A0A1B0GVN3 265 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 WWP2O00308 870 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PROM1O43490 865 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 MPZL2O60487 215 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRAMEF2O60811 474 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PFDN1O60925 122 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 BCHEP06276 602 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR12D1P0DN82 309 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 IDH2P48735 452 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 ENTPD1P49961 510 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 GABARAPL2P60520 117 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 PIGFQ07326 219 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 NCF4Q15080 339 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 FAM71E1Q6IPT2 247 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR52R1Q8NGF1 315 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 OR1F2PQ96R84 312 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 MENTQ9BUN1 341 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 SIRT5Q9NXA8 310 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 H2AFY2Q9P0M6 372 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 P2RX2Q9UBL9 471 aa11.61□□□□□ -0.55
SYNGAP1-207ENST00000628646 BLACEA4D250 179 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 F10P00742 488 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PSMB9P28065 219 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 KCNC4Q03721 635 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 GAB1Q13480 694 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ELOAQ14241 798 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PRTGQ2VWP7 1150 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 FIGNL1Q6PIW4 674 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 EGFL6Q8IUX8 553 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 SLC5A8Q8N695 610 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 LIN37Q96GY3 246 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 FER1L6-AS2Q96M78 137 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 FNDC11Q9BVV2 318 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CLN6Q9NWW5 311 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 HSPE1-MOB4S4R3N1 261 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CCNB2O95067 398 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 ALPPP05187 535 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 PCGF2P35227 344 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 CRISP3P54108 245 aa11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-207ENST00000628646 OVCH1Q7RTY7 1134 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms