RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GPR3P46089 330 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 ZNF136P52737 540 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 CDK5Q00535 292 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 MAPK14Q16539 360 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 CTF1Q16619 201 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 OCLNQ16625 522 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 SLC25A30Q5SVS4 291 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 RRM2BQ7LG56 351 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 GDF7Q7Z4P5 450 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 B3GNT7Q8NFL0 401 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 MMABQ96EY8 250 aaPredicted RBP20.51■□□□□ 0.87
PNKP-220ENST00000627232 SLC41A3Q96GZ6 507 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 DGAT2Q96PD7 388 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 POLDIP3Q9BY77 421 aaKnown RBP20.51■□□□□ 0.87
PNKP-220ENST00000627232 RBCK1Q9BYM8 510 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 SPRTNQ9H040 489 aaPredicted RBP20.51■□□□□ 0.87
PNKP-220ENST00000627232 AMBNQ9NP70 447 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 CLDN16Q9Y5I7 305 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 GON4LQ3T8J9 2241 aa20.51■□□□□ 0.87
PNKP-220ENST00000627232 PCDH15Q96QU1 1955 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 GXYLT2A0PJZ3 443 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 TTC36A6NLP5 189 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 FMO6PO60774 539 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 BCL10O95999 233 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 STSP08842 583 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 C21orf33P30042 268 aaPredicted RBP20.5■□□□□ 0.87
PNKP-220ENST00000627232 HOXA6P31267 233 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 STT3AP46977 705 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 MAT1AQ00266 395 aaKnown RBP20.5■□□□□ 0.87
PNKP-220ENST00000627232 ST3GAL4Q11206 333 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 NR1D2Q14995 579 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 NKAIN2Q5VXU1 208 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 RASSF6Q6ZTQ3 369 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 MED25Q71SY5 747 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 PRICKLE2Q7Z3G6 844 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 P2RY8Q86VZ1 359 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 PLXDC1Q8IUK5 500 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 GPA33Q99795 319 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 CDCA4Q9BXL8 241 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 ITPAQ9BY32 194 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 NECTIN3Q9NQS3 549 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 FBXO34Q9NWN3 711 aa20.5■□□□□ 0.87
PNKP-220ENST00000627232 HEMK1Q9Y5R4 338 aaPredicted RBP20.5■□□□□ 0.87
PNKP-220ENST00000627232 KNL1Q8NG31 2342 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 CCDC163A0A0D9SF12 145 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 CENPVL1A0A0U1RR11 272 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 A0A1B0GVT2 93 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 CDHR4A6H8M9 788 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 SLC22A1O15245 554 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 DUX1O43812 170 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 MAN1A2O60476 641 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 KCNK2O95069 426 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 LCKP06239 509 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 CDK4P11802 303 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 GLB1P16278 677 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 OMPP47874 163 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 GIPRP48546 466 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 EMDP50402 254 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 SMSP52788 366 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 OR1D5P58170 312 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 DMWDQ09019 674 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 SERTAD2Q14140 314 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 GINS1Q14691 196 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 MRPL2Q5T653 305 aaKnown RBP20.49■□□□□ 0.87
PNKP-220ENST00000627232 MEDAGQ5VYS4 303 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 MBOAT2Q6ZWT7 520 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 FAM26EQ8N5C1 309 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 OR51Q1Q8NH59 317 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 IL4I1Q96RQ9 567 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 SELENONQ9NZV5 590 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 SEMA5BQ9P283 1151 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 KCNE5Q9UJ90 142 aa20.49■□□□□ 0.87
PNKP-220ENST00000627232 TRAPPC13A5PLN9 417 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 CLDN24A6NM45 220 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 TMX2-CTNND1H3BSU7 103 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 PRAMEF2O60811 474 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 ENTPD6O75354 484 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 FPR3P25089 353 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 STAT5AP42229 794 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 GPLD1P80108 840 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 HSD11B2P80365 405 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 PSG6Q00889 435 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 AQP6Q13520 282 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 FIGNL1Q6PIW4 674 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 MRGPREQ86SM8 312 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 KIF18BQ86Y91 864 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 NKAIN4Q8IVV8 208 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 SLC25A45Q8N413 288 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 TEX47Q8TBZ9 253 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 KRCC1Q9NPI7 259 aaPredicted RBP20.48■□□□□ 0.87
PNKP-220ENST00000627232 NTNG1Q9Y2I2 539 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 H3BMH7 237 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 PEX12O00623 359 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 THY1P04216 161 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 ZNF182P17025 639 aaPredicted RBP20.48■□□□□ 0.87
PNKP-220ENST00000627232 CD1CP29017 333 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 TGFBR2P37173 567 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 PCYT1AP49585 367 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 BTG2P78543 158 aa20.48■□□□□ 0.87
PNKP-220ENST00000627232 LSM11P83369 360 aaKnown RBP eCLIP20.48■□□□□ 0.871e-11■■■■■ 50.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms