RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 V9GY05 133 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 RPS10-NUDT3A0A1W2PQS6 291 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 C1orf226A1L170 272 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 UBL3O95164 117 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 MAT2AP31153 395 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 HTR3AP46098 478 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 RPS10P46783 165 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 LRIF1Q5T3J3 769 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 ZNF587Q96SQ5 575 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 TBL1XR1Q9BZK7 514 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TREX1Q9NSU2 369 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 GSRP00390 522 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TP53P04637 393 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 RAB6AP20340 208 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 AFF3P51826 1226 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 GP2P55259 537 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 TEKQ02763 1124 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TLE3Q04726 772 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 ZNF91Q05481 1191 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 DECR1Q16698 335 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 C9orf131Q5VYM1 1079 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 C14orf80Q86SX3 495 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 EID2Q8N6I1 236 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 LUZP4Q9P127 313 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 DEC1Q9P2X7 70 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 CNTRLQ7Z7A1 2325 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 ZNF705GA8MUZ8 300 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 GNSP15586 552 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TNFRSF1BP20333 461 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 MAOBP27338 520 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 GNRHRP30968 328 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 SORDQ00796 357 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PRKCZQ05513 592 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PSAPL1Q6NUJ1 521 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 MAMDC4Q6UXC1 1216 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 NLRP8Q86W28 1048 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 GLB1L2Q8IW92 636 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 OR4K14Q8NGD5 310 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 WDR20Q8TBZ3 569 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 RPL10LQ96L21 214 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 PKMYT1Q99640 499 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 CPPED1Q9BRF8 314 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 NIT2Q9NQR4 276 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 HIF3AQ9Y2N7 669 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 AK6Q9Y3D8 172 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 ADAM18Q9Y3Q7 739 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 IMPA2O14732 288 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 RNF13O43567 381 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 TGM4P49221 684 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TAS2R20P59543 309 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 SELENBP1Q13228 472 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 HUS1BQ8NHY5 278 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 G6PC3Q9BUM1 346 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 SAP130Q9H0E3 1048 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 UPK3BL1B0FP48 263 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 UPK3BL2E5RIL1 263 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 POP7O75817 140 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 TBX18O95935 607 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 GP1BBP13224 206 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 HTR4Q13639 388 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 CCINQ13939 588 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 PM20D1Q6GTS8 502 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 TFGQ92734 400 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 SYNPO2LQ9H987 977 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 MAN2C1Q9NTJ4 1040 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 MED17Q9NVC6 651 aa8.44□□□□□ -1.06
VCL-206ENST00000623461 DIMT1Q9UNQ2 313 aaKnown RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 SIPA1L3O60292 1781 aaPredicted RBP8.44□□□□□ -1.06
VCL-206ENST00000623461 HRH2P25021 359 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 MECP2P51608 486 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 RING1Q06587 406 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ZNF440Q8IYI8 595 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 OR52E2Q8NGJ4 325 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SMPDL3BQ92485 455 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 PRRC1Q96M27 445 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 GAL3ST4Q96RP7 486 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 HRH4Q9H3N8 390 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 H2BFMP0C1H6 154 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 LIPAP38571 399 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 FKBP1BP68106 108 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 AMZ1Q400G9 498 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TMEM35AQ53FP2 167 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TMEM200AQ86VY9 491 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CPOQ8IVL8 374 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 OR51A7Q8NH64 312 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 GLYATL1Q969I3 302 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SAMD11Q96NU1 681 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC12A9Q9BXP2 914 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 MTHFD2LQ9H903 347 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC22A11Q9NSA0 550 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 RCE1Q9Y256 329 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 LRP6O75581 1613 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 FKTNO75072 461 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 RAD51DO75771 328 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 NFATC1O95644 943 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SERPINF1P36955 418 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.43□□□□□ -1.063e-7■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms