RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CTSAP10619 480 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 DRD2P14416 443 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 HTR1FP30939 366 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 LCN1P31025 176 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 MAPK9P45984 424 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 PRLHRP49683 370 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 RNF144AP50876 292 aaPredicted RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 PCBP4P57723 403 aaKnown RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 HTRA3P83110 453 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 DGCR2P98153 550 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 NLRC3Q7RTR2 1065 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TMEM150AQ86TG1 271 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 ARL14EPQ8N8R7 260 aaPredicted RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 CHST14Q8NCH0 376 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 ST8SIA4Q92187 359 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 EXOSC8Q96B26 276 aaKnown RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 TM4SF18Q96CE8 201 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 CASD1Q96PB1 797 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 FCRL4Q96PJ5 515 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 ERMAPQ96PL5 475 aaPredicted RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 SLC9B1P1A6NJY1 282 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 SOCS6O14544 535 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 MT-ND4P03905 459 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 PPP2R1BP30154 601 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 RAG2P55895 527 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 SHC2P98077 582 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TMEM44Q2T9K0 475 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 WASH2PQ6VEQ5 465 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 BTN2A1Q7KYR7 527 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 KANSL1Q7Z3B3 1105 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 SLC35G5Q96KT7 338 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 TMEM168Q9H0V1 697 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 HCN3Q9P1Z3 774 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 A0A0G2JK05 382 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 SLC2A10O95528 541 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 HPXP02790 462 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 URODP06132 367 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 GALTP07902 379 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 ANKRD34CP0C6C1 535 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 UGT2B7P16662 529 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 IFNGR2P38484 337 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 BDH1Q02338 343 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 TUSC1Q2TAM9 212 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 TMEM220Q6QAJ8 160 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 TRAM1L1Q8N609 369 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 ZNF527Q8NB42 609 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 OR51G2Q8NGK0 314 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 JAM3Q9BX67 310 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 SPRTNQ9H040 489 aaPredicted RBP13.21□□□□□ -0.29
LDB3-209ENST00000623056 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 NLGN3Q9NZ94 848 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 RABL2AQ9UBK7 228 aaPredicted RBP13.21□□□□□ -0.29
LDB3-209ENST00000623056 POMT2Q9UKY4 750 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 CLEC4AQ9UMR7 237 aa13.21□□□□□ -0.29
LDB3-209ENST00000623056 A0A1W2PRG6 482 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 MFSD2BA6NFX1 497 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 POP4O95707 220 aaKnown RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 IFNA16P05015 189 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 PRKACAP17612 351 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 NUP62P37198 522 aaPredicted RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 FRKP42685 505 aaPredicted RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 TAS2R41P59536 307 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 ZSWIM7Q19AV6 140 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 HENMT1Q5T8I9 393 aaKnown RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 TXNDC8Q6A555 127 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 OR6M1Q8NGM8 313 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 FIBINQ8TAL6 211 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 TRMT2BQ96GJ1 504 aaKnown RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 FBXO9Q9UK97 447 aaPredicted RBP13.21□□□□□ -0.3
LDB3-209ENST00000623056 CHST2Q9Y4C5 530 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 YIPF1Q9Y548 306 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.3
LDB3-209ENST00000623056 CASP8AP2Q9UKL3 1982 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 J3QRE1 110 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 TBX19O60806 448 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
LDB3-209ENST00000623056 CHRM4P08173 479 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 TBXA2RP21731 343 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 XPAP23025 273 aaPredicted RBP13.2□□□□□ -0.3
LDB3-209ENST00000623056 CST5P28325 142 aaPredicted RBP13.2□□□□□ -0.3
LDB3-209ENST00000623056 VIPR1P32241 457 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 OMPP47874 163 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 BLVRAP53004 296 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 TSPAN5P62079 268 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 RIPPLY1Q0D2K3 151 aa13.2□□□□□ -0.3
LDB3-209ENST00000623056 OPCMLQ14982 345 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms